RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 TRAM1Q15629 374 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 C6orf201Q7Z4U5 140 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 SPARTQ8N0X7 666 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 PRR18Q8N4B5 295 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 KLHDC1Q8N7A1 406 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 C11orf44Q8N8P7 122 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 OR6M1Q8NGM8 313 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 OR2T6Q8NHC8 308 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 MRPL30Q8TCC3 161 aaKnown RBP11.93□□□□□ -0.5
KATNA1-201ENST00000335643 CFHR4Q92496 578 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 TMEM59Q9BXS4 323 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 LPAR5Q9H1C0 372 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 NDUFB11Q9NX14 153 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 TRAPPC2LQ9UL33 140 aa11.93□□□□□ -0.5
KATNA1-201ENST00000335643 RRP15Q9Y3B9 282 aaKnown RBP11.93□□□□□ -0.5
KATNA1-201ENST00000335643 SH2D7A6NKC9 451 aaPredicted RBP11.92□□□□□ -0.5
KATNA1-201ENST00000335643 SDCBPO00560 298 aaPredicted RBP11.92□□□□□ -0.5
KATNA1-201ENST00000335643 SLC17A2O00624 439 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 TIMM23O14925 209 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 ARL6IP5O75915 188 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 AMY1AP04745 511 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 AMY2AP04746 511 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 CEACAM3P40198 252 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 ZNF134P52741 427 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 CD200R1LQ6Q8B3 271 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 TREML4Q6UXN2 200 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 TOMM40LQ969M1 308 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 RPEQ96AT9 228 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 FAAP24Q9BTP7 215 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 MBNL3Q9NUK0 354 aaKnown RBP11.92□□□□□ -0.5
KATNA1-201ENST00000335643 GFOD1Q9NXC2 390 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 WNK1Q9H4A3 2382 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 TET2Q6N021 2002 aaPredicted RBP11.92□□□□□ -0.5
KATNA1-201ENST00000335643 FAM90A9PA6NNJ1 464 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 BPNT1O95861 308 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 HBZP02008 142 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 VSIG10L2P0DP72 767 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 OR10A3P58181 314 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 UBE2UQ5VVX9 321 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 ZNF439Q8NDP4 499 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 OR51D1Q8NGF3 324 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 OR10V1Q8NGI7 309 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 OR52M1Q8NGK5 317 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 OR56B4Q8NH76 319 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 KCNG3Q8TAE7 436 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 CREB3L1Q96BA8 519 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 PLGRKTQ9HBL7 147 aa11.92□□□□□ -0.5
KATNA1-201ENST00000335643 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
KATNA1-201ENST00000335643 SOCS1O15524 211 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 TSPAN15O95858 294 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 GLAP06280 429 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 BRS3P32247 399 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 REG1BP48304 166 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 MADCAM1Q13477 382 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 GNMTQ14749 295 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 HES5Q5TA89 166 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 SLC16A12Q6ZSM3 486 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 NR2C2APQ86WQ0 139 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 DRAM1Q8N682 238 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 OR10X1Q8NGY0 326 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 WIPF2Q8TF74 440 aaPredicted RBP11.91□□□□□ -0.5
KATNA1-201ENST00000335643 RBM14Q96PK6 669 aaKnown RBP11.91□□□□□ -0.5
KATNA1-201ENST00000335643 SLC25A33Q9BSK2 321 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 TAF9BQ9HBM6 251 aa11.91□□□□□ -0.5
KATNA1-201ENST00000335643 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
KATNA1-201ENST00000335643 OOSP1A8MZH6 123 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 HSD17B6O14756 317 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 SNRNP70P08621 437 aaKnown RBP11.9□□□□□ -0.5
KATNA1-201ENST00000335643 ARSBP15848 533 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 BLVRBP30043 206 aaPredicted RBP11.9□□□□□ -0.5
KATNA1-201ENST00000335643 RAB11BQ15907 218 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 LINC00311Q8N616 119 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 HDHD3Q9BSH5 251 aaPredicted RBP11.9□□□□□ -0.5
KATNA1-201ENST00000335643 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 WNT10AQ9GZT5 417 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 Q9H521 79 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 LIN7BQ9HAP6 207 aa11.9□□□□□ -0.5
KATNA1-201ENST00000335643 LDLRAD4O15165 306 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
KATNA1-201ENST00000335643 CA11O75493 328 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 OR2F2O95006 317 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 MNDAP41218 407 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 TMEM50BP56557 158 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 HERPUD1Q15011 391 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 CT45A1Q5HYN5 189 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 C6orf183Q5T699 404 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 C22orf42Q6IC83 251 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 CCDC144NLQ6NUI1 221 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 FAM89BQ8N5H3 189 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 OR52L2PQ8NGH6 319 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 CT45A3Q8NHU0 189 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 CAPSLQ8WWF8 208 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 ST6GALNAC6Q969X2 333 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 NEDD4LQ96PU5 975 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 OCSTAMPQ9BR26 566 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 V9GY05 133 aa11.89□□□□□ -0.51
KATNA1-201ENST00000335643 IGHV3-72A0A0B4J1Y9 119 aa11.88□□□□□ -0.51
KATNA1-201ENST00000335643 A0A0B4J203 849 aa11.88□□□□□ -0.51
KATNA1-201ENST00000335643 IGHV1-3A0A0C4DH29 117 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms