RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TRAT1Q6PIZ9 186 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 HEPN1Q6WQI6 88 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 HOGA1Q86XE5 327 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 OR52I2Q8NH67 350 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 OR1L1Q8NH94 360 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 SETD6Q8TBK2 473 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 FAHD2AQ96GK7 314 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 ST6GALNAC5Q9BVH7 336 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 GAL3ST2Q9H3Q3 398 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 SCPEP1Q9HB40 452 aa14.33□□□□□ -0.12
CHGA-202ENST00000334654 IGKV1-6A0A0C4DH72 117 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 A0A1W2PPH5 198 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 F2RL2O00254 374 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 LPLP06858 475 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 IGHV1-8P0DP01 117 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 NAT1P18440 290 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 PRTN3P24158 256 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 HLA-DRB3P79483 266 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 PRAMEF5Q5TYX0 476 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 FAM53AQ6NSI3 398 aaPredicted RBP14.32□□□□□ -0.12
CHGA-202ENST00000334654 C15orf40Q8WUR7 153 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 SNAPC3Q92966 411 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 KIRREL1Q96J84 757 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 C7orf69Q9H7B7 122 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 KLK11Q9UBX7 282 aa14.32□□□□□ -0.12
CHGA-202ENST00000334654 TRDCB7Z8K6 153 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 J3QLI3 93 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 GSTZ1O43708 216 aaPredicted RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 TOX4O94842 621 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 GSTT2P0CG29 244 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 GSTT2BP0CG30 244 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 CBX5P45973 191 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 LOXL3P58215 753 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 PRB3Q04118 309 aaPredicted RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 HERPUD1Q15011 391 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 METTL11BQ5VVY1 283 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 HCP5Q6MZN7 132 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 VMO1Q7Z5L0 202 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 SMIM4Q8WVI0 70 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 SDHCQ99643 169 aaPredicted RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 CCDC32Q9BV29 185 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 METTL8Q9H825 291 aaKnown RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 IDI2-AS1Q9NZ38 188 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 KCNIP1Q9NZI2 227 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 MGAT4AQ9UM21 535 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 AUP1Q9Y679 476 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 GABARAPH6UMI1 98 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 FCER2P06734 321 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 MRPS10P82664 201 aaKnown RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 RNASE12Q5GAN4 147 aaKnown RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 ZNF782Q6ZMW2 699 aaPredicted RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 LYSMD2Q8IV50 215 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 PRR18Q8N4B5 295 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 BEST4Q8NFU0 473 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 OR10A7Q8NGE5 316 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 UPRTQ96BW1 309 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 PCGF1Q9BSM1 259 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 SRRQ9GZT4 340 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 GSX1Q9H4S2 264 aaPredicted RBP14.31□□□□□ -0.12
CHGA-202ENST00000334654 SIRT7Q9NRC8 400 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 MTFP1Q9UDX5 166 aa14.31□□□□□ -0.12
CHGA-202ENST00000334654 MXRA5Q9NR99 2828 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 FABP7O15540 132 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 SPINT2O43291 252 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 LANCL1O43813 399 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 FPR2P25090 351 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 IGSF11Q5DX21 431 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 OR52W1Q6IF63 320 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 GDPD1Q8N9F7 314 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 OR52M1Q8NGK5 317 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 FCAMRQ8WWV6 532 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 ZNF286AQ9HBT8 521 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 KCNS2Q9ULS6 477 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 RBMX2Q9Y388 322 aaKnown RBP14.3□□□□□ -0.12
CHGA-202ENST00000334654 SESN1Q9Y6P5 492 aa14.3□□□□□ -0.12
CHGA-202ENST00000334654 HIVEP2P31629 2446 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 A0A087X0M5 115 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 A0A1B0GX30 115 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 RNASEK-C17orf49H0YIS7 233 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 HOXB4P17483 251 aaPredicted RBP14.29□□□□□ -0.12
CHGA-202ENST00000334654 KIR2DS4P43632 304 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 HTD2P86397 168 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 KLRD1Q13241 179 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 KIR2DS1Q14954 304 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 LTC4SQ16873 150 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 KLF17Q5JT82 389 aaPredicted RBP14.29□□□□□ -0.12
CHGA-202ENST00000334654 C16orf87Q6PH81 154 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 OR52L2PQ8NGH6 319 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 OR4A4PQ8NGN8 299 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 GALMQ96C23 342 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 CABLES2Q9BTV7 478 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 YAE1D1Q9NRH1 226 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 ANXA10Q9UJ72 324 aa14.29□□□□□ -0.12
CHGA-202ENST00000334654 NSD1Q96L73 2696 aaPredicted RBP14.28□□□□□ -0.12
CHGA-202ENST00000334654 MTORP42345 2549 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 IGHV3-43A0A0B4J1X8 118 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 hCG_1809904A0A1W2PP81 198 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 A0A1W2PPE2 198 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 A0A1W2PR64 198 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 A0A1W2PRV1 198 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms