RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MUC6Q6W4X9 2439 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 OR2H2O95918 312 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 CST4P01036 141 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 MARS2Q96GW9 593 aaKnown RBP12.97□□□□□ -0.33
C9orf47-201ENST00000334490 SH2D7A6NKC9 451 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF658BQ4V348 819 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-201ENST00000334490 HOGA1Q86XE5 327 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 TMEM54Q969K7 222 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 MRGPRFQ96AM1 343 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 NAAAQ02083 359 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF107Q9UII5 783 aaPredicted RBP12.96□□□□□ -0.33
C9orf47-201ENST00000334490 ZBTB34Q8NCN2 500 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 OR4F17Q8NGA8 305 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 TMEM45BQ96B21 275 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 ANK1P16157 1881 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 K7N7A8 449 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 IGHMP01871 453 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 FADS6Q8N9I5 356 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 Q9N2K0 584 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 DOK5Q9P104 306 aa12.96□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF320A2RRD8 509 aa12.96□□□□□ -0.34
C9orf47-201ENST00000334490 CYB5R3P00387 301 aaPredicted RBP12.96□□□□□ -0.34
C9orf47-201ENST00000334490 FCGR3AP08637 254 aa12.96□□□□□ -0.34
C9orf47-201ENST00000334490 FAM3AP98173 230 aa12.96□□□□□ -0.34
C9orf47-201ENST00000334490 BAGE3Q86Y29 109 aa12.96□□□□□ -0.34
C9orf47-201ENST00000334490 BAGE2Q86Y30 109 aa12.96□□□□□ -0.34
C9orf47-201ENST00000334490 OR5B3Q8NH48 314 aa12.96□□□□□ -0.34
C9orf47-201ENST00000334490 GRAMD2BQ96HH9 432 aa12.96□□□□□ -0.34
C9orf47-201ENST00000334490 NDUFA2O43678 99 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 CD200P41217 278 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 CNN1P51911 297 aaKnown RBP12.95□□□□□ -0.34
C9orf47-201ENST00000334490 PRSS54Q6PEW0 395 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 MYO7BQ6PIF6 2116 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 DUSP18Q8NEJ0 188 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 LPAR5Q9H1C0 372 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 PLSCR3Q9NRY6 295 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 HILPDAQ9Y5L2 63 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 OR5I1Q13606 314 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 ENDOGQ14249 297 aaKnown RBP12.95□□□□□ -0.34
C9orf47-201ENST00000334490 SNX22Q96L94 193 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 GPR137Q96N19 417 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 HBZP02008 142 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 ORM2P19652 201 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 MPPED2Q15777 294 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 AARDQ4LEZ3 155 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 PKIBQ9C010 78 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 KLK13Q9UKR3 277 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 RAB29O14966 203 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 GNG7O60262 68 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 APELAP0DMC3 54 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 CEBPDP49716 269 aaPredicted RBP12.95□□□□□ -0.34
C9orf47-201ENST00000334490 ZNF90Q03938 601 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 DTD1Q8TEA8 209 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
C9orf47-201ENST00000334490 VWA8A3KMH1 1905 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 XKRY2A2RUG3 117 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 LY6DQ14210 128 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 ACSF3Q4G176 576 aaPredicted RBP12.94□□□□□ -0.34
C9orf47-201ENST00000334490 OR5M8Q8NGP6 311 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 ABHD14AQ9BUJ0 271 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 PRNDQ9UKY0 176 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 KCNK7Q9Y2U2 307 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 CHST1O43916 411 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 G6PCP35575 357 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 GLRXP35754 106 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 CRYBA2P53672 197 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 B9A039 149 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 B3GALNT1O75752 331 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 ARG1P05089 322 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 LYZP61626 148 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 ZNF439Q8NDP4 499 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 OR10A7Q8NGE5 316 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 ZNF705GA8MUZ8 300 aaPredicted RBP12.94□□□□□ -0.34
C9orf47-201ENST00000334490 DNASE2O00115 360 aaPredicted RBP12.94□□□□□ -0.34
C9orf47-201ENST00000334490 SEMA7AO75326 666 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 SEZ6L2Q6UXD5 910 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 MRPL24Q96A35 216 aaKnown RBP12.94□□□□□ -0.34
C9orf47-201ENST00000334490 WDYHV1Q96HA8 205 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 G6PC2Q9NQR9 355 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 DEPPQ9NTK1 212 aa12.94□□□□□ -0.34
C9orf47-201ENST00000334490 ANKRD36A6QL64 1941 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 DHRS7CA6NNS2 312 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 PPP5D1E7EU14 171 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 CECR9P0C854 216 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 ECSCRQ19T08 205 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 PHYHD1Q5SRE7 291 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 SLC25A42Q86VD7 318 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 C9orf106Q8NAJ2 232 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 FBXL17Q9UF56 701 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 DAOP14920 347 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
C9orf47-201ENST00000334490 IGSF11Q5DX21 431 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 LYZL2Q7Z4W2 148 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 PIMREGQ9BSJ6 248 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 ATPIF1Q9UII2 106 aa12.93□□□□□ -0.34
C9orf47-201ENST00000334490 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms