RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ZNF837Q96EG3 531 aaPredicted RBP11.81□□□□□ -0.52
SYNE3-201ENST00000334258 C11orf1Q9H5F2 150 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 VSIRQ9H7M9 311 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 K7ESF4 209 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 PMS2P11Q13670 270 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 ZNF774Q6NX45 483 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 LHFPL2Q6ZUX7 228 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 ANKRD37Q7Z713 158 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 OR5T1Q8NG75 326 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 UCN2Q96RP3 112 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 CCL28Q9NRJ3 127 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 CISD1Q9NZ45 108 aaKnown RBP11.81□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM238LA0A1B0GVL6 79 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 LMO7DNF2Z398 122 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 H7BYZ3 331 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 ID3Q02535 119 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 TESK1Q15569 626 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 RNF151Q2KHN1 245 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 ARSJQ5FYB0 599 aaPredicted RBP11.8□□□□□ -0.52
SYNE3-201ENST00000334258 SLC25A26Q70HW3 274 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 C16orf82Q7Z2V1 217 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 RCC1LQ96I51 464 aaKnown RBP11.8□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM56Q96MV1 263 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 Q9N2K0 584 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM56-RWDD3S4R434 201 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
SYNE3-201ENST00000334258 P2RY6Q15077 328 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 DPPA3Q6W0C5 159 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 C22orf15Q8WYQ4 148 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 EXTL1Q92935 676 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 SRD5A3Q9H8P0 318 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 MRPS18CQ9Y3D5 142 aaKnown RBP11.8□□□□□ -0.52
SYNE3-201ENST00000334258 IFNA1P01562 189 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 SERPINE2P07093 398 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 SCTP09683 121 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 METTL15P1P0C7V9 234 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 IAPPP10997 89 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 RAET1LQ5VY80 246 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM211Q6ICI0 200 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 GUSBP11Q6P575 273 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 ODF3L1Q8IXM7 274 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 OR2M3Q8NG83 312 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 PRSS50Q9UI38 385 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 VAX2Q9UIW0 290 aa11.8□□□□□ -0.52
SYNE3-201ENST00000334258 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 CNOT4O95628 575 aaKnown RBP11.79□□□□□ -0.52
SYNE3-201ENST00000334258 SCGB1D1O95968 90 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 RBX1P62877 108 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 MAML2Q8IZL2 1156 aaPredicted RBP11.79□□□□□ -0.52
SYNE3-201ENST00000334258 OR10G4Q8NGN3 311 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 SIGLEC12Q96PQ1 595 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 CTDSP1Q9GZU7 261 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 RBKSQ9H477 322 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 MYOTQ9UBF9 498 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 DUX1O43812 170 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 ZFAND5O76080 213 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 CEACAM1P13688 526 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 GALR1P47211 349 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM241Q24JQ0 296 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 OR2V1Q8NHB1 315 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 LHX4Q969G2 390 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 PCGF1Q9BSM1 259 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 CHRNA10Q9GZZ6 450 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 AKIRIN1Q9H9L7 192 aaPredicted RBP11.79□□□□□ -0.52
SYNE3-201ENST00000334258 CDH20Q9HBT6 801 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 FUT9Q9Y231 359 aa11.79□□□□□ -0.52
SYNE3-201ENST00000334258 IGHV1OR21-1A0A087WYE8 117 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 IGKV1D-13A0A0B4J2D9 117 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 IGKV1-13P0DP09 117 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 NPBWR2P48146 333 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 NABP1Q96AH0 204 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 DEFB126Q9BYW3 111 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 ACTR3CQ9C0K3 210 aaPredicted RBP11.78□□□□□ -0.52
SYNE3-201ENST00000334258 GPR27Q9NS67 375 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 LRP4O75096 1905 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 TRAV1-1A0A0B4J248 108 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 MAP1LC3B2A6NCE7 125 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 G3V3Y1 287 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 S100GP29377 79 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 OTX1P32242 354 aaPredicted RBP11.78□□□□□ -0.52
SYNE3-201ENST00000334258 RBM11P57052 281 aaKnown RBP11.78□□□□□ -0.52
SYNE3-201ENST00000334258 PAX5Q02548 391 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 SLC25A53Q5H9E4 307 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 Q6ZPA2 131 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM18Q96B42 140 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 MAP1LC3BQ9GZQ8 125 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 SLC39A9Q9NUM3 307 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 PTRH2Q9Y3E5 179 aaKnown RBP11.78□□□□□ -0.52
SYNE3-201ENST00000334258 ZNF737O75373 536 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 GCGP01275 180 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 TDGF1P3P51864 188 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 ZFP36L1Q07352 338 aaKnown RBP11.78□□□□□ -0.52
SYNE3-201ENST00000334258 EXT1Q16394 746 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 ZNF611Q8N823 705 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 NFAM1Q8NET5 270 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms