RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MEIKINA0A087WXM9 373 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 H7C1Q1 480 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 NDUFS8O00217 210 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 NDUFB3O43676 98 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 NDUFA2O43678 99 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 MT-ND4P03905 459 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 ANXA3P12429 323 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 USF1P22415 310 aaPredicted RBP13.62□□□□□ -0.23
SHOX-201ENST00000334060 AANATQ16613 207 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 LINC00596Q86U02 117 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 RFESDQ8TAC1 157 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 SSBP3Q9BWW4 388 aaPredicted RBP13.62□□□□□ -0.23
SHOX-201ENST00000334060 MED28Q9H204 178 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 MCUBQ9NWR8 336 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 HSF4Q9ULV5 492 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 C7orf66A4D0T2 115 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 TMEM127O75204 238 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 FSTL3O95633 263 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 NAPSAO96009 420 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 IGHV3-7P01780 117 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 ATF4P18848 351 aaPredicted RBP13.62□□□□□ -0.23
SHOX-201ENST00000334060 GNB2P62879 340 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 COMMD7Q86VX2 200 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 OR8H3Q8N146 312 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 PRR18Q8N4B5 295 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 PHF21AQ96BD5 680 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 SMR3AQ99954 134 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 CMSS1Q9BQ75 279 aaKnown RBP13.62□□□□□ -0.23
SHOX-201ENST00000334060 BEX2Q9BXY8 128 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 ZMAT5Q9UDW3 170 aaKnown RBP13.62□□□□□ -0.23
SHOX-201ENST00000334060 MIOXQ9UGB7 285 aa13.62□□□□□ -0.23
SHOX-201ENST00000334060 CUBNO60494 3623 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 KRBOX1C9JBD0 128 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 TOR1AO14656 332 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 FCGR3AP08637 254 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 ZP3P21754 424 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 GLP1RP43220 463 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 ARFRP1Q13795 201 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 LTC4SQ16873 150 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 PXDC1Q5TGL8 231 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 TMEM200BQ69YZ2 307 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 TRAPPC6BQ86SZ2 158 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 CMTM3Q96MX0 182 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 ST6GALNAC5Q9BVH7 336 aa13.61□□□□□ -0.23
SHOX-201ENST00000334060 ODAMA1E959 279 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 MGST3O14880 152 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 S100A12P80511 92 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 PAX2Q02962 417 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 LRRC10Q5BKY1 277 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 FAAP20Q6NZ36 180 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 TMEM65Q6PI78 240 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 FAM185AQ8N0U4 392 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 GIMAP1Q8WWP7 306 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 DACT3Q96B18 629 aaPredicted RBP13.6□□□□□ -0.23
SHOX-201ENST00000334060 RBMXL1Q96E39 390 aaKnown RBP13.6□□□□□ -0.23
SHOX-201ENST00000334060 DNTTIP1Q9H147 329 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 IGKV1-6A0A0C4DH72 117 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 MELTFP08582 738 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 SCTP09683 121 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 RPL31P62899 125 aaKnown RBP13.6□□□□□ -0.23
SHOX-201ENST00000334060 GAPTQ8N292 157 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 C11orf42Q8N5U0 333 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 OR1L1Q8NH94 360 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 CHMP1AQ9HD42 196 aaPredicted RBP13.6□□□□□ -0.23
SHOX-201ENST00000334060 ZNRD1Q9P1U0 126 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 EDARQ9UNE0 448 aa13.6□□□□□ -0.23
SHOX-201ENST00000334060 ABCA1O95477 2261 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 IGHV3-43A0A0B4J1X8 118 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 LINC00854A0A1B0GVQ3 168 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 CSN2P05814 226 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 IGHV3-43DP0DP04 118 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 SLC25A16P16260 332 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 MNDAP41218 407 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 DSCR9P59020 149 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 B2MP61769 119 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 HERPUD1Q15011 391 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 C17orf58Q2M2W7 97 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 PRSS57Q6UWY2 283 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 NLRC3Q7RTR2 1065 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 OR4D10Q8NGI6 311 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 GPX8Q8TED1 209 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 RBPMSQ93062 196 aaKnown RBP13.59□□□□□ -0.23
SHOX-201ENST00000334060 LEAP2Q969E1 77 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 MSI2Q96DH6 328 aaKnown RBP13.59□□□□□ -0.23
SHOX-201ENST00000334060 PARP12Q9H0J9 701 aaKnown RBP13.59□□□□□ -0.23
SHOX-201ENST00000334060 SEBOXQ9HB31 216 aaPredicted RBP13.59□□□□□ -0.23
SHOX-201ENST00000334060 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.59□□□□□ -0.23
SHOX-201ENST00000334060 RPUSD1Q9UJJ7 312 aaKnown RBP13.59□□□□□ -0.23
SHOX-201ENST00000334060 MGAT4AQ9UM21 535 aa13.59□□□□□ -0.23
SHOX-201ENST00000334060 ANK3Q12955 4377 aaKnown RBP13.59□□□□□ -0.23
SHOX-201ENST00000334060 MAST4O15021 2626 aa13.58□□□□□ -0.23
SHOX-201ENST00000334060 C12orf77C9JDV5 145 aa13.58□□□□□ -0.24
SHOX-201ENST00000334060 FABP7O15540 132 aa13.58□□□□□ -0.24
SHOX-201ENST00000334060 SLC6A1P30531 599 aa13.58□□□□□ -0.24
SHOX-201ENST00000334060 METTL11BQ5VVY1 283 aa13.58□□□□□ -0.24
SHOX-201ENST00000334060 SHEQ5VZ18 495 aa13.58□□□□□ -0.24
SHOX-201ENST00000334060 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
SHOX-201ENST00000334060 FAM234AQ9H0X4 552 aa13.58□□□□□ -0.24
SHOX-201ENST00000334060 SPACA1Q9HBV2 294 aa13.58□□□□□ -0.24
SHOX-201ENST00000334060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms