RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 KRBOX4Q5JUW0 171 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 SFT2D1Q8WV19 159 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 DLL3Q9NYJ7 618 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 PITX3O75364 302 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 PSG2P11465 335 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 RAB5CP51148 216 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 VAMP2P63027 116 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 PLP2Q04941 152 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 SRSF7Q16629 238 aaKnown RBP eCLIP11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 P4HA3Q7Z4N8 544 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 FAM24BQ8N5W8 94 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 SLC35B3Q9H1N7 401 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 STRAPQ9Y3F4 350 aaKnown RBP11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 SVILO95425 2214 aa11.41□□□□□ -0.58
TUBA1B-201ENST00000332858 IGLV2-14P01704 120 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 F2RP25116 425 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 ARR3P36575 388 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 ERVS71-1P61550 626 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 HAGHQ16775 308 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 ALKBH6Q3KRA9 238 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 MDP1Q86V88 176 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 COMMD1Q8N668 190 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 C15orf54Q8N8G6 183 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 GPR146Q96CH1 333 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 KCNJ16Q9NPI9 418 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 TTC28Q96AY4 2481 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 CLEC18AA5D8T8 446 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 ANKRD30BLA7E2S9 258 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 CLN3Q13286 438 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 CMTM1Q8IZ96 169 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 IL22RA1Q8N6P7 574 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 CLEC18CQ8NCF0 446 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 OR2W1Q9Y3N9 320 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 CACNA1HO95180 2353 aa11.4□□□□□ -0.58
TUBA1B-201ENST00000332858 IGKV1-39P01597 117 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 IGKV1D-39P04432 117 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 SP1P08047 785 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 CEBPGP53567 150 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 ZNF266Q14584 549 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 MCEMP1Q8IX19 187 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 OR10J5Q8NHC4 309 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 SPIN2AQ99865 258 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 SPIN2BQ9BPZ2 258 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 OR51I2Q9H344 312 aa11.4□□□□□ -0.59
TUBA1B-201ENST00000332858 KIAA1324LA8MWY0 1029 aaPredicted RBP11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.596e-8■■■■■ 34.6
TUBA1B-201ENST00000332858 WISP2O76076 250 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 CD59P13987 128 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 PTAFRP25105 342 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 APLNRP35414 380 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 PLA2G5P39877 138 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 SULT1A1P50225 295 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 GNG3P63215 75 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 HMGN3Q15651 99 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 DHRS13Q6UX07 377 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 DEFB123Q8N688 67 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 DOCK11Q5JSL3 2073 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 H0Y980 276 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 SIRPB1O00241 398 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 WRBO00258 174 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 FOLR2P14207 255 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 FAM53AQ6NSI3 398 aaPredicted RBP11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 Q6P435 159 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 ZNF573Q86YE8 665 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 H1FOOQ8IZA3 346 aaPredicted RBP11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 OR5D13Q8NGL4 314 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 OR1K1Q8NGR3 316 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 GPR87Q9BY21 358 aa11.39□□□□□ -0.59
TUBA1B-201ENST00000332858 TMEM267Q0VDI3 215 aaPredicted RBP11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 RBMS3Q6XE24 437 aaKnown RBP11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 TMPRSS7Q7RTY8 843 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 SPRR3Q9UBC9 169 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 PPP1R3CQ9UQK1 317 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 CDX4O14627 284 aaPredicted RBP11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 DEGS1O15121 323 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 CTXN2P0C2S0 81 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 SLC25A31Q9H0C2 315 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 GP6Q9HCN6 339 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 MGAQ8IWI9 3026 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 RBFOX3A6NFN3 312 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 PAX6P26367 422 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 HLA-DRB3P79483 266 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 IL24Q13007 206 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 SLC10A1Q14973 349 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 RNPS1Q15287 305 aaKnown RBP11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 TESK1Q15569 626 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 SP5Q6BEB4 398 aaPredicted RBP11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 ADAM5Q6NVV9 412 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 ZNF880Q6PDB4 577 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 MDS2Q8NDY4 140 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 PBDC1Q9BVG4 233 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 OR2J1Q9GZK6 312 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 ABI3Q9P2A4 366 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 MPC1Q9Y5U8 109 aa11.38□□□□□ -0.59
TUBA1B-201ENST00000332858 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms