RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 VAMP2P63027 116 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 CLINT1Q14677 625 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 TESK1Q15569 626 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 VWA1Q6PCB0 445 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 CNEP1R1Q8N9A8 125 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 C9orf106Q8NAJ2 232 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 OR51H1Q8NH63 302 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 TMEM171Q8WVE6 324 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 K7N7A8 449 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 NXPH3O95157 252 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 CNOT4O95628 575 aaKnown RBP12.32□□□□□ -0.44
TPM3-206ENST00000330188 GRPP07492 148 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 PSG2P11465 335 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 CBR1P16152 277 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 SELEP16581 610 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 COX5AP20674 150 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 OMGP23515 440 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 ZNF266Q14584 549 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 OR8G1Q15617 311 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 HFEQ30201 348 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 TMEM182Q6ZP80 229 aaPredicted RBP12.32□□□□□ -0.44
TPM3-206ENST00000330188 WDR31Q8NA23 367 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 KLF14Q8TD94 323 aaPredicted RBP12.32□□□□□ -0.44
TPM3-206ENST00000330188 MBNL3Q9NUK0 354 aaKnown RBP12.32□□□□□ -0.44
TPM3-206ENST00000330188 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 TRAV17A0A0B4J275 112 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 TMEM210A6NLX4 147 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 AGFG2O95081 481 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 PRH1P02810 166 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
TPM3-206ENST00000330188 PRR18Q8N4B5 295 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 GPR146Q96CH1 333 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 SH2D1BO14796 132 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 CHST1O43916 411 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 ATP6V0CP27449 155 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 DYNLT3P51808 116 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 PAX9P55771 341 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 HMGN3Q15651 99 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 GUK1Q16774 197 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 UBALD1Q8TB05 177 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 AKR1E2Q96JD6 320 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 TINAGQ9UJW2 476 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
TPM3-206ENST00000330188 MLNRO43193 412 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 IGKV1-39P01597 117 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 IGKV1D-39P04432 117 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 SERPINE2P07093 398 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 SLC25A6P12236 298 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 NFYBP25208 207 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 BAXQ07812 192 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
TPM3-206ENST00000330188 OR5C1Q8NGR4 320 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 HES4Q9HCC6 221 aa12.3□□□□□ -0.44
TPM3-206ENST00000330188 A0A1B0GU03 582 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 MED19A0JLT2 244 aaPredicted RBP12.29□□□□□ -0.44
TPM3-206ENST00000330188 KIAA1324LA8MWY0 1029 aaPredicted RBP12.29□□□□□ -0.44
TPM3-206ENST00000330188 WRBO00258 174 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 CST7O76096 145 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 HAND1O96004 215 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 ACAA1P09110 424 aaPredicted RBP12.29□□□□□ -0.44
TPM3-206ENST00000330188 EPHA1P21709 976 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 HOXC12P31275 282 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
TPM3-206ENST00000330188 PPT1P50897 306 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 PEA15Q15121 130 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 FAM213BQ8TBF2 198 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 OBP2BQ9NPH6 170 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 KPTNQ9Y664 436 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 PIGBOS1A0A0B4J2F0 54 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 PRR33A8MZF0 331 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 HSPA12AO43301 675 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 HEXAP06865 529 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 FOXF2Q12947 444 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 C11orf53Q8IXP5 236 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 ZNF295-AS1Q8N0V1 137 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 OR8G5Q8NG78 346 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 OR2G3Q8NGZ4 309 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 SARAFQ96BY9 339 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 OR14J1Q9UGF5 321 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 PPP1R3CQ9UQK1 317 aa12.29□□□□□ -0.44
TPM3-206ENST00000330188 URB1O60287 2271 aaKnown RBP12.29□□□□□ -0.44
TPM3-206ENST00000330188 PSPNO60542 156 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 PPP1CCP36873 323 aaKnown RBP12.28□□□□□ -0.44
TPM3-206ENST00000330188 IZUMO4Q1ZYL8 232 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 ACSF3Q4G176 576 aaPredicted RBP12.28□□□□□ -0.44
TPM3-206ENST00000330188 Q6ZRM9 215 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 CXorf67Q86X51 503 aaPredicted RBP12.28□□□□□ -0.44
TPM3-206ENST00000330188 KCNS2Q9ULS6 477 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 PTPRBP23467 1997 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 C1QTNF9BB2RNN3 333 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 H7C2Y5 167 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 WNT9BO14905 357 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 WDR1O75083 606 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 CECR9P0C854 216 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 CEACAM6P40199 344 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 FLI1Q01543 452 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms