RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 EBI3Q14213 229 aa18.37■□□□□ 0.53
TMEM54-201ENST00000329151 LINC00311Q8N616 119 aa18.37■□□□□ 0.53
TMEM54-201ENST00000329151 CYGBQ8WWM9 190 aa18.37■□□□□ 0.53
TMEM54-201ENST00000329151 RGP1Q92546 391 aaPredicted RBP18.37■□□□□ 0.53
TMEM54-201ENST00000329151 DUX3Q96PT4 197 aa18.37■□□□□ 0.53
TMEM54-201ENST00000329151 MRPS18AQ9NVS2 196 aaKnown RBP18.37■□□□□ 0.53
TMEM54-201ENST00000329151 TRAPPC2LQ9UL33 140 aa18.37■□□□□ 0.53
TMEM54-201ENST00000329151 MCRIP1C9JLW8 97 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 LIMS3P0CW19 117 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 LIMS4P0CW20 117 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 DCKP27707 260 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 CD1BP29016 333 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 C6orf183Q5T699 404 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 TTC23Q5W5X9 447 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 C8orf31Q8N9H6 132 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 OR8H1Q8NGG4 311 aa18.36■□□□□ 0.53
TMEM54-201ENST00000329151 RTN4IP1Q8WWV3 396 aaPredicted RBP18.36■□□□□ 0.53
TMEM54-201ENST00000329151 ZNF184Q99676 751 aaPredicted RBP18.36■□□□□ 0.53
TMEM54-201ENST00000329151 FGF20Q9NP95 211 aaPredicted RBP18.36■□□□□ 0.53
TMEM54-201ENST00000329151 NKX1-2Q9UD57 310 aaPredicted RBP18.36■□□□□ 0.53
TMEM54-201ENST00000329151 SIRT4Q9Y6E7 314 aaPredicted RBP18.36■□□□□ 0.53
TMEM54-201ENST00000329151 H0YHG0 523 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 RPLP1P05386 114 aaKnown RBP18.35■□□□□ 0.53
TMEM54-201ENST00000329151 FOXE3Q13461 319 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 TMEM30BQ3MIR4 351 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 Q3ZCU0 254 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 C9orf66Q5T8R8 295 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 LCNL1Q6ZST4 164 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 PRR18Q8N4B5 295 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 DHRSXQ8N5I4 330 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 RAX2Q96IS3 184 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 ZNF581Q9P0T4 197 aa18.35■□□□□ 0.53
TMEM54-201ENST00000329151 ELANEP08246 267 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 SOX6P35712 828 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 TRAT1Q6PIZ9 186 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 ZNF497Q6ZNH5 498 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 JAGN1Q8N5M9 183 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 APH1BQ8WW43 257 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 SMIM19Q96E16 107 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 S1PR3Q99500 378 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 VCXQ9H320 206 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 ETAA1Q9NY74 926 aa18.34■□□□□ 0.53
TMEM54-201ENST00000329151 LINC01548A6NM66 108 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 C15orf65H3BRN8 121 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 MT-ND4P03905 459 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 OR5H8P0DN80 308 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 ETV1P50549 477 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 ADARB1P78563 741 aaKnown RBP18.33■□□□□ 0.52
TMEM54-201ENST00000329151 DEFB136Q30KP8 78 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 OR2G6Q5TZ20 316 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 Q8N9W7 124 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 BABAM2Q9NXR7 383 aa18.33■□□□□ 0.52
TMEM54-201ENST00000329151 EXOSC1Q9Y3B2 195 aaKnown RBP18.33■□□□□ 0.52
TMEM54-201ENST00000329151 NHLRC4P0CG21 123 aaPredicted RBP18.32■□□□□ 0.52
TMEM54-201ENST00000329151 KIR2DS1Q14954 304 aa18.32■□□□□ 0.52
TMEM54-201ENST00000329151 SYT6Q5T7P8 510 aaPredicted RBP18.32■□□□□ 0.52
TMEM54-201ENST00000329151 XAF1Q6GPH4 301 aa18.32■□□□□ 0.52
TMEM54-201ENST00000329151 Q8N6K4 173 aa18.32■□□□□ 0.52
TMEM54-201ENST00000329151 SETD9Q8NE22 299 aa18.32■□□□□ 0.52
TMEM54-201ENST00000329151 OR10V1Q8NGI7 309 aa18.32■□□□□ 0.52
TMEM54-201ENST00000329151 MRPS24Q96EL2 167 aaKnown RBP18.32■□□□□ 0.52
TMEM54-201ENST00000329151 KCNIP1Q9NZI2 227 aa18.32■□□□□ 0.52
TMEM54-201ENST00000329151 MRPS28Q9Y2Q9 187 aaKnown RBP18.32■□□□□ 0.52
TMEM54-201ENST00000329151 SEC14L6B5MCN3 397 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 WBP4O75554 376 aaKnown RBP18.31■□□□□ 0.52
TMEM54-201ENST00000329151 VSIG8P0DPA2 414 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 CDX1P47902 265 aaPredicted RBP18.31■□□□□ 0.52
TMEM54-201ENST00000329151 SMN1Q16637 294 aaKnown RBP18.31■□□□□ 0.52
TMEM54-201ENST00000329151 Q499Y3 187 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 RAB12Q6IQ22 244 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 TMEM65Q6PI78 240 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 SLC25A48Q6ZT89 311 aaKnown RBP18.31■□□□□ 0.52
TMEM54-201ENST00000329151 OR4K15Q8NH41 348 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 GHSRQ92847 366 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 MUL1Q969V5 352 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 PEX16Q9Y5Y5 336 aa18.31■□□□□ 0.52
TMEM54-201ENST00000329151 A0A1W2PP11 408 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 C12orf77C9JDV5 145 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 CAPGP40121 348 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 ECI1P42126 302 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 LUMP51884 338 aaPredicted RBP18.3■□□□□ 0.52
TMEM54-201ENST00000329151 YIF1BQ5BJH7 314 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 AWAT2Q6E213 333 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 GLIPR1L1Q6UWM5 242 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 OR13C5Q8NGS8 318 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 ORAI1Q96D31 301 aa18.3■□□□□ 0.52
TMEM54-201ENST00000329151 ZNF107Q9UII5 783 aaPredicted RBP18.3■□□□□ 0.52
TMEM54-201ENST00000329151 OGG1O15527 345 aa18.29■□□□□ 0.52
TMEM54-201ENST00000329151 HBZP02008 142 aa18.29■□□□□ 0.52
TMEM54-201ENST00000329151 MMDQ15546 238 aa18.29■□□□□ 0.52
TMEM54-201ENST00000329151 TMEM104Q8NE00 496 aa18.29■□□□□ 0.52
TMEM54-201ENST00000329151 C4orf3Q8WVX3 66 aa18.29■□□□□ 0.52
TMEM54-201ENST00000329151 ST6GALNAC6Q969X2 333 aa18.29■□□□□ 0.52
TMEM54-201ENST00000329151 SLC31A2O15432 143 aa18.28■□□□□ 0.52
TMEM54-201ENST00000329151 CA11O75493 328 aa18.28■□□□□ 0.52
TMEM54-201ENST00000329151 MYF6P23409 242 aa18.28■□□□□ 0.52
TMEM54-201ENST00000329151 TMEM80Q96HE8 168 aa18.28■□□□□ 0.52
TMEM54-201ENST00000329151 PRR25Q96S07 402 aa18.28■□□□□ 0.52
TMEM54-201ENST00000329151 SELENOIQ9C0D9 397 aa18.28■□□□□ 0.52
TMEM54-201ENST00000329151 OR2S2Q9NQN1 319 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms