RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 EDN3P14138 238 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 TCN2P20062 427 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 FBLP22087 321 aaKnown RBP10.95□□□□□ -0.66
CCDC60-201ENST00000327554 IL3RAP26951 378 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 TDRG1Q3Y452 100 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 PARM1Q6UWI2 310 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 LHFPL2Q6ZUX7 228 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 MRPL30Q8TCC3 161 aaKnown RBP10.95□□□□□ -0.66
CCDC60-201ENST00000327554 LHX4Q969G2 390 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 GPR146Q96CH1 333 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 IL23AQ9NPF7 189 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 CCL28Q9NRJ3 127 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 IL36GQ9NZH8 169 aa10.95□□□□□ -0.66
CCDC60-201ENST00000327554 H0Y980 276 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 TNFSF13O75888 250 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 IGKV1D-33P01593 117 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 IGKV1-33P01594 117 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 GYPAP02724 150 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 IGHV4-34P06331 123 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 CCL5P13501 91 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 RBM11P57052 281 aaKnown RBP10.94□□□□□ -0.66
CCDC60-201ENST00000327554 SHBQ15464 509 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 FAM180AQ6UWF9 173 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 FOXL2NBQ6ZUU3 175 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 RNF138Q8WVD3 245 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 CFHR5Q9BXR6 569 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 PLA2G3Q9NZ20 509 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 GCH1P30793 250 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 FASLGP48023 281 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 TNFSF10P50591 281 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 C10orf128Q5T292 105 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 TEX43Q6ZNM6 134 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 Q6ZS49 121 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
CCDC60-201ENST00000327554 PINX1Q96BK5 328 aaKnown RBP10.94□□□□□ -0.66
CCDC60-201ENST00000327554 OR2J1Q9GZK6 312 aa10.94□□□□□ -0.66
CCDC60-201ENST00000327554 AQP7P3A6NL99 342 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 TUSC2O75896 110 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 SCTP09683 121 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 CD33P20138 364 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 LCN2P80188 198 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 CALHM1Q8IU99 346 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 WDR61Q9GZS3 305 aaKnown RBP10.93□□□□□ -0.66
CCDC60-201ENST00000327554 CHRNA10Q9GZZ6 450 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 PARD6AQ9NPB6 346 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 SLC39A9Q9NUM3 307 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 PLEK2Q9NYT0 353 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 TRANK1O15050 2925 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 LOC102725191A0A1B0GVB3 256 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 C10orf142B7Z368 130 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 TLX3O43711 291 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-201ENST00000327554 CNOT4O95628 575 aaKnown RBP10.93□□□□□ -0.66
CCDC60-201ENST00000327554 GUCA1AP43080 201 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-201ENST00000327554 TPTE2P1Q5T6R2 138 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 TMEM42Q69YG0 159 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 Q6ZRM9 215 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 SHISA6Q6ZSJ9 500 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 GATAD1Q8WUU5 269 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 SPTSSAQ969W0 71 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-201ENST00000327554 ASCL3Q9NQ33 180 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 KLRF1Q9NZS2 232 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 PXMP4Q9Y6I8 212 aa10.93□□□□□ -0.66
CCDC60-201ENST00000327554 LILRA5A6NI73 299 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 PGLYRP1O75594 196 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-201ENST00000327554 OR7C1O76099 320 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-201ENST00000327554 IAPPP10997 89 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 SLC25A6P12236 298 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 CRYGSP22914 178 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 PTGDSP41222 190 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 GNG10P50151 68 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 TRA2AQ13595 282 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC60-201ENST00000327554 TESK1Q15569 626 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 FBXW9Q5XUX1 488 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 KCNIP4Q6PIL6 250 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 Q6ZWC4 215 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 OR1L3Q8NH93 324 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 TMEM54Q969K7 222 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 RIMS4Q9H426 269 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-201ENST00000327554 GPR27Q9NS67 375 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 TMEM106BQ9NUM4 274 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 TRAPPC1Q9Y5R8 145 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 C5orf67F2Z3F1 127 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 NRASP01111 189 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 UMODP07911 640 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 PSMB3P49720 205 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 UBE2NP61088 152 aaKnown RBP10.92□□□□□ -0.66
CCDC60-201ENST00000327554 OR5I1Q13606 314 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 FAM78BQ5VT40 261 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 CST9LP1Q5W188 147 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 BATF2Q8N1L9 274 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 EXTL1Q92935 676 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 HLA-CQ95604 372 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 WDYHV1Q96HA8 205 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 OR4C12Q96R67 309 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 PARD6GQ9BYG4 376 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms