RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TOX2Q96NM4 488 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 HDGFL3Q9Y3E1 203 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 ALOX12BO75342 701 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 TNFSF10P50591 281 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 ARF6P62330 175 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 SLC25A26Q70HW3 274 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 TGIF2LYQ8IUE0 185 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 POM121L2Q96KW2 1035 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 RNF2Q99496 336 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 TLN2Q9Y4G6 2542 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 RER1O15258 196 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 SPRY1O43609 319 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-201ENST00000322213 HPRT1P00492 218 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 ISG15P05161 165 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 HIST1H1EP10412 219 aaKnown RBP6.21□□□□□ -1.42
SMC1A-201ENST00000322213 TNFRSF4P43489 277 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 FOXK1P85037 733 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 BAHD1Q8TBE0 780 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-201ENST00000322213 IMMP2LQ96T52 175 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 TRBV5-5A0A0J9YX44 114 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 PDCD6O75340 191 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 NANOS3P60323 173 aaKnown RBP6.21□□□□□ -1.42
SMC1A-201ENST00000322213 VCX2Q9H322 139 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 VENTXO95231 258 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 CTLA4P16410 223 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 FOLR3P41439 243 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 DMWDQ09019 674 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 FAM53BQ14153 422 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 TSEN54Q7Z6J9 526 aaKnown RBP6.21□□□□□ -1.42
SMC1A-201ENST00000322213 RBKSQ9H477 322 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 PPYP01298 95 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 LSM6P62312 80 aaKnown RBP6.21□□□□□ -1.42
SMC1A-201ENST00000322213 PRICKLE4Q2TBC4 344 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 SHISA6Q6ZSJ9 500 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 LYZL2Q7Z4W2 148 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 Q8WTZ3 238 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 FGF13Q92913 245 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 LPAR2Q9HBW0 351 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 CDC42EP3Q9UKI2 254 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF835Q9Y2P0 537 aa6.21□□□□□ -1.42
SMC1A-201ENST00000322213 IGSF23A1L1A6 192 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 NPIPB7O75200 414 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 MRPS18BQ9Y676 258 aaKnown RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 TNRC6BQ9UPQ9 1833 aaKnown RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 PLPP3O14495 311 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 MPLP40238 635 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 ANKRD55Q3KP44 614 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 HIST3H2BBQ8N257 126 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 RNASEH2CQ8TDP1 164 aaKnown RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM222Q9H0R3 208 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 A0A1B0GX78 115 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 NKX2-6A6NCS4 301 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 DPRXA6NFQ7 191 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 F8VVB4 439 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 F8VWA3 439 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 CEBPBP17676 345 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 RND3P61587 244 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 MYBPHQ13203 477 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 AAED1Q7RTV5 226 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 BOD1Q96IK1 185 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 H3BNC9 293 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 C1QL1O75973 258 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 CD226Q15762 336 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 TTC32Q5I0X7 151 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 LYSMD4Q5XG99 296 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM211Q6ICI0 200 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 STRADBQ9C0K7 418 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM242Q9NWH2 141 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 PTRH2Q9Y3E5 179 aaKnown RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 SIRT4Q9Y6E7 314 aaPredicted RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 TTC28Q96AY4 2481 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 H0Y980 276 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 GALR2O43603 387 aaPredicted RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 SYNGR2O43760 224 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 ID4P47928 161 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 WDR25Q64LD2 544 aaPredicted RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 OR1F12Q8NHA8 337 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF732B4DXR9 585 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM250H0YL14 139 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 CAMPP49913 170 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 COL9A2Q14055 689 aaPredicted RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 FBXL14Q8N1E6 418 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 CA13Q8N1Q1 262 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 OR8B12Q8NGG6 310 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 SRD5A3Q9H8P0 318 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 MBNL1Q9NR56 388 aaKnown RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 C5orf49A4QMS7 147 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 H3BVH4 76 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 RAB29O14966 203 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 F11P03951 625 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 BARX1Q9HBU1 254 aaPredicted RBP6.2□□□□□ -1.42
SMC1A-201ENST00000322213 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 PRSS47A8MTI9 375 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 NKX2-2O95096 273 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 MELTFP08582 738 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 BHLHA9Q7RTU4 235 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 GUCD1Q96NT3 240 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 AAMDCQ9H7C9 122 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms