RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ADAD2Q8NCV1 583 aaKnown RBP14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 OR11G2Q8NGC1 345 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 MRGPRFQ96AM1 343 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 HLA-DQA1P01909 254 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 NAAAQ02083 359 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 Q8WTZ3 238 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 ZNF576Q9H609 170 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 SPTA1P02549 2419 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 STAG3L3P0CL85 134 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 COL19A1Q14993 1142 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 ZNF793Q6ZN11 406 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 GMPPAQ96IJ6 420 aaPredicted RBP14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 HSPB9Q9BQS6 159 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 LRRC61Q9BV99 259 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 ZNF385CQ66K41 422 aaPredicted RBP14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 LRRK1Q38SD2 2015 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 ID1P41134 155 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 GUCD1Q96NT3 240 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 ERVFRD-1P60508 538 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 CALHM1Q8IU99 346 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
SMCHD1-201ENST00000320876 OGG1O15527 345 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 LSM6P62312 80 aaKnown RBP14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 RNF122Q9H9V4 155 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 RCC2Q9P258 522 aaKnown RBP14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 SHISA8B8ZZ34 492 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 COMPP49747 757 aaPredicted RBP14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 FZD5Q13467 585 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 WDR81Q562E7 1941 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 HBZP02008 142 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 MFAP2P55001 183 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 PRNTQ86SH4 94 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 OR51M1Q9H341 326 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 C1RLQ9NZP8 487 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 A8MWL6 223 aa14.85□□□□□ -0.03
SMCHD1-201ENST00000320876 TSPAN13O95857 204 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 ZNF250P15622 560 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 TNFSF18Q9UNG2 199 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 STRCP1A6NGW2 1772 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 UQCRFS1P47985 274 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 REC114Q7Z4M0 266 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 LDLRAD3Q86YD5 345 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 RNF224P0DH78 156 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 SKP2Q13309 424 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 ADAMTS17Q8TE56 1095 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 GLRX2Q9NS18 164 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 PTP4A1Q93096 173 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 MMP16P51512 607 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 MRPS11P82912 194 aaKnown RBP14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 DDA1Q9BW61 102 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 OR4A8P0C604 315 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 B4GALNT1Q00973 533 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 TXNDC17Q9BRA2 123 aa14.84□□□□□ -0.03
SMCHD1-201ENST00000320876 CDC42EP2O14613 210 aa14.83□□□□□ -0.03
SMCHD1-201ENST00000320876 MSRB3Q8IXL7 192 aa14.83□□□□□ -0.03
SMCHD1-201ENST00000320876 IGLV3-16A0A075B6K0 115 aa14.83□□□□□ -0.03
SMCHD1-201ENST00000320876 HTN1P15515 57 aa14.83□□□□□ -0.03
SMCHD1-201ENST00000320876 COX7A1P24310 79 aa14.83□□□□□ -0.03
SMCHD1-201ENST00000320876 CIRBPQ14011 172 aaKnown RBP14.83□□□□□ -0.03
SMCHD1-201ENST00000320876 OR1P1Q8NH06 330 aa14.83□□□□□ -0.03
SMCHD1-201ENST00000320876 TRAV17A0A0B4J275 112 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 NKX2-6A6NCS4 301 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 SLC23A3Q6PIS1 610 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 ABHD3Q8WU67 409 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 GNRHR2Q96P88 292 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 HIGD1AQ9Y241 93 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 DOCK4Q8N1I0 1966 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 CDK2AP1O14519 115 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 UBE2L6O14933 153 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 AMY1AP04745 511 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 SRFP11831 508 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 ZNF137PP52743 207 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 EMP1P54849 157 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 TMEM70Q9BUB7 260 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 F2RL2O00254 374 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 FAM131CQ96AQ9 280 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 PAXXQ9BUH6 204 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 PPP1CCP36873 323 aaKnown RBP14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 CCL7P80098 99 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 PRR13Q9NZ81 148 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 SPTBN2O15020 2390 aa14.83□□□□□ -0.04
SMCHD1-201ENST00000320876 MEF2BQ02080 365 aaPredicted RBP14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 FAM222BQ8WU58 562 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 HINT1P49773 126 aaPredicted RBP14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 WDR34Q96EX3 536 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 GAPDHP04406 335 aaKnown RBP14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 WIPI1Q5MNZ9 446 aaPredicted RBP14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 OR1K1Q8NGR3 316 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 MS4A3Q96HJ5 214 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 HARBI1Q96MB7 349 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 PMCHL2Q9BQD1 86 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 RAXQ9Y2V3 346 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 THSD4Q6ZMP0 1018 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 SYT8Q8NBV8 401 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 PTX4Q96A99 478 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 OR51B2Q9Y5P1 312 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 SYNGR1O43759 233 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 ZNF519Q8TB69 540 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 ELF5Q9UKW6 265 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms