RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 NICN1Q9BSH3 213 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 SLC25A33Q9BSK2 321 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 TM2D1Q9BX74 207 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 PRSS22Q9GZN4 317 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 ETAA1Q9NY74 926 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 PEX16Q9Y5Y5 336 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 IGHV3-43A0A0B4J1X8 118 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 SHISA3A0PJX4 238 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 SH2D7A6NKC9 451 aaPredicted RBP11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 IGHV3-43DP0DP04 118 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 CD28P10747 220 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 FUT3P21217 361 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 BRS3P32247 399 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 CEACAM3P40198 252 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 RPS27AP62979 156 aaKnown RBP11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 ZNF816Q0VGE8 651 aaPredicted RBP11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 TCTEX1D4Q5JR98 221 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 SYT6Q5T7P8 510 aaPredicted RBP11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 THNSL2Q86YJ6 484 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 DRAM1Q8N682 238 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 OR4K15Q8NH41 348 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 OR56B4Q8NH76 319 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 OR1L1Q8NH94 360 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 TOMM40LQ969M1 308 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 RBMXL1Q96E39 390 aaKnown RBP11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 CNBD2Q96M20 576 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 MGLLQ99685 303 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 SULT4A1Q9BR01 284 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 RAB26Q9ULW5 256 aa11.62□□□□□ -0.55
PPP1CA-201ENST00000312989 MCRIP1C9JLW8 97 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 CA11O75493 328 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 MPIG6BO95866 241 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 SNRNP70P08621 437 aaKnown RBP11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 UBBP0CG47 229 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 HTR2CP28335 458 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 HSPA13P48723 471 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 ZNF137PP52743 207 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 MADCAM1Q13477 382 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 EBI3Q14213 229 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 CCDC144NLQ6NUI1 221 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 Q6ZTK2 550 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 Q8N6K4 173 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 RPEQ96AT9 228 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 VCX3BQ9H321 246 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 ACOT13Q9NPJ3 140 aa11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 AMMECR1Q9Y4X0 333 aaPredicted RBP11.61□□□□□ -0.55
PPP1CA-201ENST00000312989 UBE2QL1A1L167 161 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 SDCBPO00560 298 aaPredicted RBP11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 HSD17B6O14756 317 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 LDLRAD4O15165 306 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 HBZP02008 142 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 HSMCR30P0CW71 290 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 C2orf68Q2NKX9 166 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 Q3ZCU0 254 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 GLT8D1Q68CQ7 371 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 CD200R1LQ6Q8B3 271 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 C10orf99Q6UWK7 81 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 SLC25A48Q6ZT89 311 aaKnown RBP11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 OR8H3Q8N146 312 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 LYG1Q8N1E2 194 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 OR6M1Q8NGM8 313 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 NEK7Q8TDX7 302 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 CST11Q9H112 138 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 LPAR5Q9H1C0 372 aa11.6□□□□□ -0.55
PPP1CA-201ENST00000312989 SLC17A2O00624 439 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 NAPSAO96009 420 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 MNDAP41218 407 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 VDAC2P45880 294 aaPredicted RBP11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 REG1BP48304 166 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 RAB7AP51149 207 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 EMX1Q04741 257 aaPredicted RBP11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 PLA2G7Q13093 441 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 GNMTQ14749 295 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 ABCA11PQ4W5N1 156 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 ZNF880Q6PDB4 577 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 C6orf201Q7Z4U5 140 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 FAM89BQ8N5H3 189 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 DTX3Q8N9I9 347 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 CCDC90BQ9GZT6 254 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 TAF9BQ9HBM6 251 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 AK6Q9Y3D8 172 aaKnown RBP11.59□□□□□ -0.55
PPP1CA-201ENST00000312989 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 FBXO24O75426 580 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 BPNT1O95861 308 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 LPLP06858 475 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 CSF1P09603 554 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 PSMA1P25786 263 aaKnown RBP11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 CD83Q01151 205 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 TRAM1Q15629 374 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 HMGN3Q15651 99 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 C6orf183Q5T699 404 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 ZNF367Q7RTV3 350 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 ZNF554Q86TJ5 538 aa11.58□□□□□ -0.56
PPP1CA-201ENST00000312989 ODF3L1Q8IXM7 274 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms