RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DRD3P35462 400 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 TNFSF10P50591 281 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 FAM166AQ6J272 317 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 CRISPLD2Q9H0B8 497 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 RAB29O14966 203 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 SMIM10L1P0DMW3 83 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 OR1L8Q8NGR8 309 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 SMIM10Q96HG1 83 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 TRAV30A0A087WSZ9 112 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 RNF222A6NCQ9 220 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 SRSF4Q08170 494 aaKnown RBP7.73□□□□□ -1.17
COL6A5-202ENST00000312481 SQSTM1Q13501 440 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 PCNPQ8WW12 178 aaKnown RBP7.73□□□□□ -1.17
COL6A5-202ENST00000312481 GHRHP01286 108 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 BCL3P20749 454 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 ZFP36L2P47974 494 aaKnown RBP7.73□□□□□ -1.17
COL6A5-202ENST00000312481 BATFQ16520 125 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 SMUG1Q53HV7 270 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 TMEM183AQ8IXX5 376 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 A0A1B0GV50 99 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 CCSO14618 274 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 IGLV3-19P01714 112 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 FOXF1Q12946 379 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 LCN15Q6UWW0 184 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 LRRTM1Q86UE6 522 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 PRR18Q8N4B5 295 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 LINC00470Q9BZP3 86 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 CDC14CA4D256 554 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 TM4SF5O14894 197 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 PPM1DO15297 605 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 USF1P22415 310 aaPredicted RBP7.72□□□□□ -1.17
COL6A5-202ENST00000312481 AVPR2P30518 371 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 WDR13Q9H1Z4 485 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 GPR37O15354 613 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 HYAL1Q12794 435 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 TBC1D26Q86UD7 250 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 TMEM123Q8N131 208 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 ATOH1Q92858 354 aaPredicted RBP7.72□□□□□ -1.17
COL6A5-202ENST00000312481 MBD1Q9UIS9 605 aaPredicted RBP7.72□□□□□ -1.17
COL6A5-202ENST00000312481 POM121BA6NF01 834 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 SMPD2O60906 423 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 NGFP01138 241 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 ANKRD37Q7Z713 158 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 SH3BGRL3Q9H299 93 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 IGHV1OR21-1A0A087WYE8 117 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 F8VVB4 439 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 F8VWA3 439 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 MESTQ5EB52 335 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 CACNG8Q8WXS5 425 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 CLDN14O95500 239 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 SFTPCP11686 197 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 CEACAM16Q2WEN9 425 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 LILRA3Q8N6C8 439 aaPredicted RBP7.72□□□□□ -1.17
COL6A5-202ENST00000312481 SMIM12Q96EX1 92 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 RAB1BQ9H0U4 201 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 CRYBA1P05813 215 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 LIPFP07098 398 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 OPRM1P35372 400 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 PRDX4Q13162 271 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 EID2BQ96D98 161 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 LINC00052Q96N35 136 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 PRSS27Q9BQR3 290 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 ZMIZ1Q9ULJ6 1067 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 WIPI2Q9Y4P8 454 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 IGLV3-32A0A0A0MS00 114 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 SELENOPP49908 381 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 ZNF645Q8N7E2 425 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 OR4C3Q8NH37 302 aa7.72□□□□□ -1.17
COL6A5-202ENST00000312481 OR2M5A3KFT3 312 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 FNDC10F2Z333 226 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 DDTP30046 118 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 KLF3P57682 345 aaPredicted RBP7.71□□□□□ -1.17
COL6A5-202ENST00000312481 TMPRSS9Q7Z410 1059 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 DDA1Q9BW61 102 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 PARD6GQ9BYG4 376 aaPredicted RBP7.71□□□□□ -1.17
COL6A5-202ENST00000312481 UCP2P55851 309 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 EWSR1Q01844 656 aaKnown RBP eCLIP7.71□□□□□ -1.17
COL6A5-202ENST00000312481 HERPUD1Q15011 391 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 RFLNAQ6ZTI6 216 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 HS3ST1O14792 307 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 NPY1RP25929 384 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 DYNLT3P51808 116 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 MEX3DQ86XN8 651 aaKnown RBP7.71□□□□□ -1.17
COL6A5-202ENST00000312481 RELL2Q8NC24 303 aaPredicted RBP7.71□□□□□ -1.17
COL6A5-202ENST00000312481 GPR35Q9HC97 309 aa7.71□□□□□ -1.17
COL6A5-202ENST00000312481 GPX4P36969 197 aaPredicted RBP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 ACER2Q5QJU3 275 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF519Q8TB69 540 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 ALKBH3Q96Q83 286 aaPredicted RBP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 KCNK17Q96T54 332 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 C5orf52A6NGY3 159 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 OR1D5P58170 312 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 LIFP15018 202 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 TMEM267Q0VDI3 215 aaPredicted RBP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 TUSC1Q2TAM9 212 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 REC114Q7Z4M0 266 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 RHNO1Q9BSD3 238 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 OR2J1Q9GZK6 312 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 NRG2O14511 850 aaPredicted RBP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 SLC25A17O43808 307 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms