RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 RAB13P51153 203 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 Q5BKY6 102 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 PLAC9Q5JTB6 97 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 ZNF665Q9H7R5 613 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 LPAR3Q9UBY5 353 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 IGHV3OR15-7A0A075B7D8 119 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 A0A0B4J293 547 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 A0A1B0GU03 582 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 KCNAB3O43448 404 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 MELTFP08582 738 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 CD59P13987 128 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 EWSR1Q01844 656 aaKnown RBP eCLIP9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 KIAA0141Q14154 515 aaPredicted RBP9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 NRN1LQ496H8 165 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 MOB3AQ96BX8 217 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 ACY3Q96HD9 319 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 TMEM56Q96MV1 263 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 ZNF251Q9BRH9 671 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 MS4A5Q9H3V2 200 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 DLL3Q9NYJ7 618 aa9.84□□□□□ -0.83
PCDHGC3-201ENST00000308177 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPIHO43447 177 aaKnown RBP9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPP1CCP36873 323 aaKnown RBP9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 AKR1C3P42330 323 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 COL10A1Q03692 680 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 TLE1Q04724 770 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 FFAR4Q5NUL3 377 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR8G5Q8NG78 346 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 KLF14Q8TD94 323 aaPredicted RBP9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 Q9N2K0 584 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPP5D1E7EU14 171 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 FGF2P09038 288 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 CD200P41217 278 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF154Q13106 437 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 TMEM41BQ5BJD5 291 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 Q6ZT83 130 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 LINC00052Q96N35 136 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 NARFLQ9H6Q4 476 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 IL36GQ9NZH8 169 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR5AC2Q9NZP5 309 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 MAP1LC3B2A6NCE7 125 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR2A4O95047 310 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 UCNP55089 124 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 NDUFA6P56556 154 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 UBE2G2P60604 165 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 ATP6V1FQ16864 119 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 ANKRD55Q3KP44 614 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 ABLIM2Q6H8Q1 611 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 TVP23CQ96ET8 276 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR2A7Q96R45 310 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 HSD17B10Q99714 261 aaKnown RBP9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 MAP1LC3BQ9GZQ8 125 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 MTCH1Q9NZJ7 389 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 SCN8AQ9UQD0 1980 aa9.83□□□□□ -0.84
PCDHGC3-201ENST00000308177 LYPD8Q6UX82 237 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ADAMTS17Q8TE56 1095 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 C2CD4CQ8TF44 421 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 RPEQ96AT9 228 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ATP5SQ99766 215 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 TMEM147Q9BVK8 224 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 SAMD10Q9BYL1 202 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 SLC35B3Q9H1N7 401 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 SLC35D1Q9NTN3 355 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 NPTNQ9Y639 398 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 TP53BP1Q12888 1972 aaPredicted RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 RCC1P18754 421 aaPredicted RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 CCL8P80075 99 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 FLI1Q01543 452 aaPredicted RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR2V2Q96R30 315 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF552Q9H707 407 aaPredicted RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 CRYM-AS1A6NIL9 109 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 J3QW42 95 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 MGST3O14880 152 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 LHX2P50458 406 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 BPIFB3P59826 476 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 NCR3LG1Q68D85 454 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR10S1Q8NGN2 331 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 DTD1Q8TEA8 209 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 CABLES2Q9BTV7 478 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 TMEM222Q9H0R3 208 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ONECUT1Q9UBC0 465 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 SPTBN1Q01082 2364 aaKnown RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 SPTAN1Q13813 2472 aaKnown RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF705FA8MVS1 300 aaPredicted RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPP1R2P9O14990 202 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF705DP0CH99 300 aaPredicted RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF705BP0CI00 300 aaPredicted RBP9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 CTSSP25774 331 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 SULT1A1P50225 295 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 NAAAQ02083 359 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 C9orf152Q5JTZ5 239 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 ASPHD2Q6ICH7 369 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 RAB1BQ9H0U4 201 aa9.82□□□□□ -0.84
PCDHGC3-201ENST00000308177 SNRNP200O75643 2136 aaKnown RBP9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 TMEM218A2RU14 115 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 NEURL1O76050 574 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 YIF1AO95070 293 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 CFDP00746 253 aaPredicted RBP9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 OPN1MWP04001 364 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 OPN1MW2P0DN77 364 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms