RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 KIR2DS2P43631 304 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 FDX2Q6P4F2 183 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 SSX8Q7RTT4 187 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 LHFPL4Q7Z7J7 247 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 SH2D2AQ9NP31 389 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 OR5B21A6NL26 309 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 HSBP1O75506 76 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 ID1P41134 155 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 RIPPLY3P57055 190 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 RPEL1Q2QD12 228 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.76□□□□□ -1.33
SCN9A-201ENST00000303354 FADS6Q8N9I5 356 aa6.76□□□□□ -1.33
SCN9A-201ENST00000303354 C9JCJ5 164 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 SLC25A17O43808 307 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 DAOP14920 347 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 HIST1H3AP68431 136 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 ASAH1Q13510 395 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF596Q8TC21 504 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 RNF122Q9H9V4 155 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 AHRRA9YTQ3 701 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 C4orf51C9J302 202 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 H0YL77 283 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 HBZP02008 142 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 FAM181AQ8N9Y4 354 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 OR8A1Q8NGG7 326 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 PLEKHA2Q9HB19 425 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 LIMS3P0CW19 117 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 LIMS4P0CW20 117 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF770Q6IQ21 691 aaPredicted RBP6.75□□□□□ -1.33
SCN9A-201ENST00000303354 MESP1Q9BRJ9 268 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 PIPOXQ9P0Z9 390 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 EXOGQ9Y2C4 368 aaKnown RBP6.75□□□□□ -1.33
SCN9A-201ENST00000303354 PDE4DIPQ5VU43 2346 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 TRAV8-7A0A075B6U6 113 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 BTF3P20290 206 aaKnown RBP6.75□□□□□ -1.33
SCN9A-201ENST00000303354 KLK15Q9H2R5 256 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 CCL27Q9Y4X3 112 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 MMP24Q9Y5R2 645 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 SNRPGP15A8MWD9 76 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 SFTA3P0C7M3 94 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 OR1L1Q8NH94 360 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 MARVELD3Q96A59 401 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 GPA33Q99795 319 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 WFDC6Q9BQY6 131 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 DDA1Q9BW61 102 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 SF3B5Q9BWJ5 86 aaKnown RBP6.75□□□□□ -1.33
SCN9A-201ENST00000303354 LPAR5Q9H1C0 372 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 DEFA6Q01524 100 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 DDB2Q92466 427 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 MYO18AQ92614 2054 aaKnown RBP6.75□□□□□ -1.33
SCN9A-201ENST00000303354 BSPH1Q075Z2 132 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 KIR3DL3Q8N743 410 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 OR2D3Q8NGH3 330 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 DMRTA2Q96SC8 542 aa6.75□□□□□ -1.33
SCN9A-201ENST00000303354 TAAR5O14804 337 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 COL8A1P27658 744 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 GLIPR1P48060 266 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 HLA-DRB3P79483 266 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 VAMP3Q15836 100 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 FAM168AQ92567 244 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 LOXL4Q96JB6 756 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 PARD6AQ9NPB6 346 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 IL36RNQ9UBH0 155 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 HSF4Q9ULV5 492 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 SCN7AQ01118 1682 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 MAP1LC3B2A6NCE7 125 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 NPBWR2P48146 333 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 MAP1LC3BQ9GZQ8 125 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 CALYQ9NYX4 217 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 B4E171 279 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 PAGE4O60829 102 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 TSPAN7P41732 249 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 HMGN3Q15651 99 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 BAP18Q8IXM2 172 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 COL4A1P02462 1669 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 A0A1B0GU03 582 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 RAB19A4D1S5 217 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 K7N7A8 449 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 FCN1O00602 326 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 ZG16O60844 167 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 KLF14Q8TD94 323 aaPredicted RBP6.74□□□□□ -1.33
SCN9A-201ENST00000303354 AMELYQ99218 206 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 CHRDL1Q9BU40 450 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 F12P00748 615 aaPredicted RBP6.74□□□□□ -1.33
SCN9A-201ENST00000303354 C1QAP02745 245 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 AMMECR1LQ6DCA0 310 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 TRAV1-2A0A0B4J238 106 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 DHRS7CA6NNS2 312 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 CTF1Q16619 201 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 GUK1Q16774 197 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 TMEM97Q5BJF2 176 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 FGF5P12034 268 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 CRYBB2P43320 205 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 SSX1Q16384 188 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF66Q6ZN08 573 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 RCC2Q9P258 522 aaKnown RBP6.74□□□□□ -1.33
SCN9A-201ENST00000303354 RAMP1O60894 148 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF324O75467 553 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms