RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 ATP5J2P56134 94 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 MEF2CQ06413 473 aaPredicted RBP17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 OR1L1Q8NH94 360 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 MARCH1Q8TCQ1 289 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 H1FXQ92522 213 aaKnown RBP17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 NEIL1Q96FI4 390 aaPredicted RBP17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 SCGB3A2Q96PL1 93 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 RAB9BQ9NP90 201 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 C15orf65H3BRN8 121 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 PPYP01298 95 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 FPR2P25090 351 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 PDLIM4P50479 330 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 HERV-K104P61576 105 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 RPL31P62899 125 aaKnown RBP17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 SURF2Q15527 256 aaPredicted RBP17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 LPAR3Q9UBY5 353 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 VSIG4Q9Y279 399 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 LINC00312Q9Y6C7 94 aa17.17■□□□□ 0.34
PACSIN3-201ENST00000298838 A0A0B4J293 547 aa17.16■□□□□ 0.34
PACSIN3-201ENST00000298838 ZBTB25P24278 435 aa17.16■□□□□ 0.34
PACSIN3-201ENST00000298838 TCF23Q7RTU1 214 aa17.16■□□□□ 0.34
PACSIN3-201ENST00000298838 TMED4Q7Z7H5 227 aa17.16■□□□□ 0.34
PACSIN3-201ENST00000298838 MOB3AQ96BX8 217 aa17.16■□□□□ 0.34
PACSIN3-201ENST00000298838 OR1A1Q9P1Q5 309 aa17.16■□□□□ 0.34
PACSIN3-201ENST00000298838 CELSR2Q9HCU4 2923 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 FAM172BPA6NC97 362 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 GPR37O15354 613 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 TUSC2O75896 110 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 ANXA7P20073 488 aaKnown RBP17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 AADACP22760 399 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 MECP2P51608 486 aaKnown RBP17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 FXYD4P59646 89 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 H1FOOQ8IZA3 346 aaPredicted RBP17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 CORO2AQ92828 525 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 C19orf12Q9NSK7 152 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 CALYQ9NYX4 217 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 CLN8Q9UBY8 286 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 ZNF69Q9UC07 566 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 UBE2J1Q9Y385 318 aaPredicted RBP17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 DOCK11Q5JSL3 2073 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 ARID1AO14497 2285 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 FBN2P35556 2912 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 PTPN13Q12923 2485 aa17.15■□□□□ 0.34
PACSIN3-201ENST00000298838 PRAF2O60831 178 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 WNT2P09544 360 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 PGAM2P15259 253 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 PAX1P15863 534 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 BAMBIQ13145 260 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 ZNF841Q6ZN19 808 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 RFESDQ8TAC1 157 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 NINJ1Q92982 152 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 TOMM40LQ969M1 308 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 BEX2Q9BXY8 128 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 FXYD6Q9H0Q3 95 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 NARFLQ9H6Q4 476 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 PATZ1Q9HBE1 687 aaKnown RBP17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 BEX1Q9HBH7 125 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 GPR132Q9UNW8 380 aa17.14■□□□□ 0.34
PACSIN3-201ENST00000298838 TRBV23-1A0A0A0MS06 115 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 KBTBD11-OT1A0A1B0GTJ5 212 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 ZNF729A6NN14 1252 aaPredicted RBP17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 HEXAP06865 529 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 ZNF728P0DKX0 622 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 CGB3P0DN86 165 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 CGB7P0DN87 165 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 HTD2P86397 168 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 PERPQ96FX8 193 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 BPESC1Q9GZL8 116 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 OR2W1Q9Y3N9 320 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 ALG5Q9Y673 324 aa17.14■□□□□ 0.33
PACSIN3-201ENST00000298838 CEACAM6P40199 344 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 FAM185AQ8N0U4 392 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 DACT3Q96B18 629 aaPredicted RBP17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 GSX2Q9BZM3 304 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 GAL3ST2Q9H3Q3 398 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 C5orf66Q9H5L9 145 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 OR2S2Q9NQN1 319 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 RDH8Q9NYR8 311 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 TAS2R3Q9NYW6 316 aa17.13■□□□□ 0.33
PACSIN3-201ENST00000298838 KRTAP10-9P60411 292 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 C17orf58Q2M2W7 97 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 WDR25Q64LD2 544 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 CLEC2AQ6UVW9 174 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 OR52L2PQ8NGH6 319 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 ZFAND1Q8TCF1 268 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 FAM168AQ92567 244 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 ALX4Q9H161 411 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 JPT1Q9UK76 154 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 C14orf166Q9Y224 244 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 C7orf66A4D0T2 115 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 NDUFS8O00217 210 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 F2RL2O00254 374 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 BCAP31P51572 246 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 UCP3P55916 312 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 ZNF273Q14593 569 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 METTL11BQ5VVY1 283 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 TMEM200BQ69YZ2 307 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 GLDNQ6ZMI3 551 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 SLC38A6Q8IZM9 456 aa17.12■□□□□ 0.33
PACSIN3-201ENST00000298838 CADM3Q8N126 398 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms