RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CCR5P51681 352 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 KIR2DS1Q14954 304 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 HERPUD1Q15011 391 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 SSC4DQ8WTU2 575 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 TBX15Q96SF7 602 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 SNHG12Q9BXW3 62 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 TWSG1Q9GZX9 223 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 PARD6AQ9NPB6 346 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 CLEC18AA5D8T8 446 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 SLC22A20A6NK97 555 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 SCRG1O75711 98 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 EGR1P18146 543 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 NUBP1P53384 320 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 ID3Q02535 119 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 ACOT6Q3I5F7 207 aaPredicted RBP9.81□□□□□ -0.84
TRUB1-201ENST00000298746 C9orf50Q5SZB4 431 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 AAED1Q7RTV5 226 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 CLEC18CQ8NCF0 446 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 SAMD10Q9BYL1 202 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 MSL2Q9HCI7 577 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 GPR27Q9NS67 375 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 MYO15AQ9UKN7 3530 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 PAM16Q9Y3D7 125 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 C2orf16Q68DN1 1984 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 USF3Q68DE3 2245 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 IGHV3-64DA0A0J9YX35 117 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 MKRN2OSH3BPM6 223 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 BCL3P20749 454 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 EIF3IQ13347 325 aaKnown RBP9.81□□□□□ -0.84
TRUB1-201ENST00000298746 SPACA9Q96E40 222 aaPredicted RBP9.81□□□□□ -0.84
TRUB1-201ENST00000298746 OR4C12Q96R67 309 aa9.81□□□□□ -0.84
TRUB1-201ENST00000298746 DNAJC13O75165 2243 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 CCL2P13500 99 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 CNN1P51911 297 aaKnown RBP9.8□□□□□ -0.84
TRUB1-201ENST00000298746 RND2P52198 227 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 HLA-BQ31612 363 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 BTNL3Q6UXE8 466 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 C10orf35Q96D05 121 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 PARLQ9H300 379 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 DCAF16Q9NXF7 216 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 CBY1Q9Y3M2 126 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 LAMA1P25391 3075 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 PAGE4O60829 102 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 F2RP25116 425 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 SLC38A11Q08AI6 406 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 RAB35Q15286 201 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 CRIP3Q6Q6R5 217 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 MRPL21Q7Z2W9 205 aaKnown RBP9.8□□□□□ -0.84
TRUB1-201ENST00000298746 TMEM56Q96MV1 263 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 RASL10BQ96S79 203 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 TMEM56-RWDD3S4R434 201 aa9.8□□□□□ -0.84
TRUB1-201ENST00000298746 LOC102725191A0A1B0GVB3 256 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 LMO7DNF2Z398 122 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 RPL36A-HNRNPH2H7BZ11 118 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 PGLYRP1O75594 196 aaPredicted RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 HRASP01112 189 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 CRYAAP02489 173 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 RSPO1Q2MKA7 263 aaPredicted RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 CEACAM16Q2WEN9 425 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 YRDCQ86U90 279 aaKnown RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 OR10V1Q8NGI7 309 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 PINX1Q96BK5 328 aaKnown RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 ACTR3CQ9C0K3 210 aaPredicted RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 IL36RNQ9UBH0 155 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 A0A0G2JRQ6 117 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 A0A1B0GUS0 222 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 GYPAP02724 150 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 SERPINA7P05543 415 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 COX5BP10606 129 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 PCP4P48539 62 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 RPL23P62829 140 aaKnown RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 GNB2P62879 340 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 KCNMB1Q16558 191 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 OR56B2PQ8NGI1 322 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 TMEM242Q9NWH2 141 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 C19orf25Q9UFG5 118 aaPredicted RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 NAGKQ9UJ70 344 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 VAMP5O95183 116 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 GZMHP20718 246 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 CCKARP32238 428 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 PLA2G5P39877 138 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 ERVFC1-1P60608 527 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 OR5I1Q13606 314 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 PRSS8Q16651 343 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 MCEMP1Q8IX19 187 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 GATAD1Q8WUU5 269 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 ACY3Q96HD9 319 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 NEU1Q99519 415 aa9.79□□□□□ -0.84
TRUB1-201ENST00000298746 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
TRUB1-201ENST00000298746 A0A096LPE4 126 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 A0A1W2PPZ6 126 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 GRIFINA4D1Z8 144 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 KRASP01116 189 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 DEFA4P12838 97 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 UCP1P25874 307 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 ZXDAP98168 799 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 EXT1Q16394 746 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms