RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MIOXQ9UGB7 285 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 ERVFRD-1P60508 538 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 ARL16Q0P5N6 197 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 KIAA0141Q14154 515 aaPredicted RBP20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 APH1AQ96BI3 265 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 FOXJ2Q9P0K8 574 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 ARHGAP21Q5T5U3 1957 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 TRAV20A0A0B4J274 112 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 AP4M1O00189 453 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 CER1O95813 267 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 ZNF324BQ6AW86 544 aaPredicted RBP20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 TMEM45BQ96B21 275 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 DLL3Q9NYJ7 618 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 KIAA1456Q9P272 454 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 OR2W1Q9Y3N9 320 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 LAMTOR5O43504 91 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 IGKV1-39P01597 117 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 IGKV1D-39P04432 117 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 NDUFA6P56556 154 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 ZNF674Q2M3X9 581 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 PDZD11Q5EBL8 140 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 OR5P3Q8WZ94 311 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 ATP5SQ99766 215 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 TTTY12Q9BZ98 90 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 KCNS2Q9ULS6 477 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 SPENQ96T58 3664 aaKnown RBP20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 H0Y980 276 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 SYNGR4O95473 234 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 SMIM6P0DI80 62 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 OR1C1Q15619 314 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM58AQ8N1B3 248 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 OR5D13Q8NGL4 314 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 CLDND2Q8NHS1 167 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 ZNF665Q9H7R5 613 aa20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 SEBOXQ9HB31 216 aaPredicted RBP20.74■□□□□ 0.91
SPTSSA-201ENST00000298130 WDR1O75083 606 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 S100A8P05109 93 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 PMELP40967 661 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 PLGLB1Q02325 96 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 ABHD17BQ5VST6 288 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 SSX7Q7RTT5 188 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 YPEL4Q96NS1 127 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 RAB11AP62491 216 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 Q6ZS49 121 aa20.73■□□□□ 0.91
SPTSSA-201ENST00000298130 IGKV3D-15A0A087WSY6 115 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A10PA6NDY2 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A18PA6NE21 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A16PA6NEW6 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A20PA6NIJ5 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A8PA6NJQ4 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A7PA6NKC0 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 ANKRD30BLA7E2S9 258 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A22PA8MWA6 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A12PA8MX19 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A5PA8MXJ8 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A23PA8MXZ1 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 IGHEP01854 428 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A15PP0C7V4 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A13PP0C7W8 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A14PP0C7W9 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM90A24PP0C7X0 464 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 RPS16P62249 146 aaKnown RBP20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 STX12Q86Y82 276 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 TMEM251Q8N6I4 163 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 OR5A2Q8NGI9 324 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 RPRMQ9NS64 109 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 OR2B11Q5JQS5 317 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 CDPF1Q6NVV7 123 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 GNPNAT1Q96EK6 184 aaPredicted RBP20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM173AQ9BQD7 235 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 ZNF251Q9BRH9 671 aa20.72■□□□□ 0.91
SPTSSA-201ENST00000298130 DEGS1O15121 323 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 YKT6O15498 198 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 CEBPDP49716 269 aaPredicted RBP20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 TAS2R30P59541 319 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 ERVS71-1P61550 626 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 HMGB3O15347 200 aaKnown RBP20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 MT-CO3P00414 261 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 IFNA17P01571 189 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 PLP2Q04941 152 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 ELOBQ15370 118 aa20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 KDF1Q8NAX2 398 aaPredicted RBP20.71■□□□□ 0.91
SPTSSA-201ENST00000298130 CLEC18AA5D8T8 446 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 KIAA1324LA8MWY0 1029 aaPredicted RBP20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 C9orf172C9J069 976 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 IGLV2-14P01704 120 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 TFF1P04155 84 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 CELA3BP08861 270 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 TDGF1P13385 188 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 MDKP21741 143 aaPredicted RBP20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 CLEC18CQ8NCF0 446 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 TCTEX1D2Q8WW35 142 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 RNF150Q9ULK6 438 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 CHD3Q12873 2000 aaKnown RBP20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 A0A1B0GW64 132 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 ELLP55199 621 aaPredicted RBP20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 HLA-DRB3P79483 266 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 NIPSNAP3BQ9BS92 247 aa20.7■□□□□ 0.9
SPTSSA-201ENST00000298130 TNRC6BQ9UPQ9 1833 aaKnown RBP20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 A0A1W2PNU3 283 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms