RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 METTL9Q9H1A3 318 aa12.46□□□□□ -0.41
TMEM41A-201ENST00000296254 AIPO00170 330 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 CSTBP04080 98 aaKnown RBP12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 CD2P06729 351 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 INSL3P51460 131 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 GBX2P52951 348 aaPredicted RBP12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 F2RL1P55085 397 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 RAB40BQ12829 278 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 ZIK1Q3SY52 487 aaPredicted RBP12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 SLC25A48Q6ZT89 311 aaKnown RBP12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 ZNF439Q8NDP4 499 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 MUC7Q8TAX7 377 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 GPR148Q8TDV2 347 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 CCDC107Q8WV48 283 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 TMEM106AQ96A25 262 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 RBMXL1Q96E39 390 aaKnown RBP12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 TMEM138Q9NPI0 162 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 ZNF107Q9UII5 783 aaPredicted RBP12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 SMAD5-AS1Q9Y6J3 95 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 TENM2Q9NT68 2774 aa12.45□□□□□ -0.42
TMEM41A-201ENST00000296254 C12orf77C9JDV5 145 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 MT-ND4P03905 459 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 OR8U8P0C7N1 319 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 SERPINA2P20848 420 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 ZNF93P35789 620 aaPredicted RBP12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 VHLP40337 213 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 RASSF2P50749 326 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 ALDH3A2P51648 485 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 PPP3R1P63098 170 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 TMEM30BQ3MIR4 351 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 CASC10Q5T4H9 136 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 NEK7Q8TDX7 302 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 UBE2E2Q96LR5 201 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 AMBNQ9NP70 447 aa12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 PAK1IP1Q9NWT1 392 aaPredicted RBP12.44□□□□□ -0.42
TMEM41A-201ENST00000296254 DNAH1Q9P2D7 4330 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 A0A1W2PP11 408 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 I3L521 148 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 ZNF780AO75290 641 aaPredicted RBP12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 LY86O95711 162 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 SLC2A2P11168 524 aaPredicted RBP12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 PPIFP30405 207 aaKnown RBP12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 RUNX1Q01196 453 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 ZNF616Q08AN1 781 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 LSAMPQ13449 338 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 MMDQ15546 238 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 ATAD3CQ5T2N8 411 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 XAF1Q6GPH4 301 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 OR52I1Q8NGK6 324 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 PYDC1Q8WXC3 89 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 RCHY1Q96PM5 261 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 CHCHD6Q9BRQ6 235 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 GNB4Q9HAV0 340 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 ING4Q9UNL4 249 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 GMPPBQ9Y5P6 360 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
TMEM41A-201ENST00000296254 CSMD3Q7Z407 3707 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 GTF2F2P13984 249 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 MYF6P23409 242 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 BDKRB2P30411 391 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 ZNF134P52741 427 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 KIAA0141Q14154 515 aaPredicted RBP12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 SLC22A6Q4U2R8 563 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 STX19Q8N4C7 294 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 RHOXF1Q8NHV9 184 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 Q96MT0 163 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 S100A13Q99584 98 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 SPACA1Q9HBV2 294 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 RAB9BQ9NP90 201 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 MRPS18AQ9NVS2 196 aaKnown RBP12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 VSIG4Q9Y279 399 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 SORL1Q92673 2214 aa12.42□□□□□ -0.42
TMEM41A-201ENST00000296254 G3V318 75 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 SPINT2O43291 252 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 LANCL1O43813 399 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 CIB2O75838 187 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 GNB1P62873 340 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 CCDC58Q4VC31 144 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 C6orf183Q5T699 404 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 FAM27D1Q5T7N8 215 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 SYT6Q5T7P8 510 aaPredicted RBP12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 STEAP3Q658P3 488 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 RPL22L1Q6P5R6 122 aaKnown RBP12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 TMEM65Q6PI78 240 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 ZNF429Q86V71 674 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 SBSPONQ8IVN8 264 aa12.41□□□□□ -0.42
TMEM41A-201ENST00000296254 GAPTQ8N292 157 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms