RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 SLC52A3Q9NQ40 469 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 SPTA1P02549 2419 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 LOC107984156A0A0G2JMH3 177 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 MKRN2OSH3BPM6 223 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 DNPH1O43598 174 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 ACP1P24666 158 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 UQCRFS1P47985 274 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 YBX1P67809 324 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 SKP2Q13309 424 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 ZNF841Q6ZN19 808 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 ARL17AQ8IVW1 177 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 AMER3Q8N944 861 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 VSIG4Q9Y279 399 aa9.45□□□□□ -0.9
PKNOX1-201ENST00000291547 TNFSF15O95150 251 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 ZNF205O95201 554 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 CCL2P13500 99 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 MFAP2P55001 183 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 NAAAQ02083 359 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 SMAD4Q13485 552 aaKnown RBP9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 ZNF502Q8TBZ5 544 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 HSPB9Q9BQS6 159 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 SERTM1A2A2V5 107 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 GNG7O60262 68 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 RECKO95980 971 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 PPYP01298 95 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 MGPP08493 103 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 LYZL2Q7Z4W2 148 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 OR8I2Q8N0Y5 310 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 CCL28Q9NRJ3 127 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 MGAMO43451 1857 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 MARCH11A6NNE9 402 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 TRDCB7Z8K6 153 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 M0R296 226 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 FABP2P12104 132 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 HTN1P15515 57 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 ATP6V0CP27449 155 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 CD82P27701 267 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 HOXA6P31267 233 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 PRRX1P54821 245 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 FAM3BP58499 235 aaPredicted RBP9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 KLF9Q13886 244 aaPredicted RBP9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 PERPQ96FX8 193 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 NEU3Q9UQ49 428 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 DTX4Q9Y2E6 619 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 NKX2-6A6NCS4 301 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 CDS2O95674 445 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 HIST1H1BP16401 226 aaKnown RBP9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 PAFAH1B2P68402 229 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 KHDC3LQ587J8 217 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 OR8B12Q8NGG6 310 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 HEXA-AS1Q9H8Q6 139 aa9.44□□□□□ -0.9
PKNOX1-201ENST00000291547 OGG1O15527 345 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 MYF5P13349 255 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 MMP9P14780 707 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 NUTF2P61970 127 aaKnown RBP9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 ADIPOQQ15848 244 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 SPRED2Q7Z698 418 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 OR4X1Q8NH49 305 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 OR2V2Q96R30 315 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 PLA2G3Q9NZ20 509 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 PPIL1Q9Y3C6 166 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 LILRA5A6NI73 299 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 SPINK2P20155 84 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 C21orf58P58505 322 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 CBLN3Q6UW01 205 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 C16orf82Q7Z2V1 217 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 OR5R1Q8NH85 324 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 NDUFAF3Q9BU61 184 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 NUP205Q92621 2012 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 FZD5Q13467 585 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 RNPS1Q15287 305 aaKnown RBP9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 SFTPA2Q8IWL1 248 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 SFTPA1Q8IWL2 248 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 DEFB123Q8N688 67 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 MRGPRFQ96AM1 343 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 RAB37Q96AX2 223 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 LRRC3BQ96PB8 259 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 PIPOXQ9P0Z9 390 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 H7C2G1 150 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 PLPP3O14495 311 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 CEACAM3P40198 252 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 TNFAIP6P98066 277 aaPredicted RBP9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 TMEM196Q5HYL7 178 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 RSG1Q9BU20 258 aa9.43□□□□□ -0.9
PKNOX1-201ENST00000291547 IGKV3-7A0A075B6H7 116 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 LMO7DNF2Z398 122 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 PPIHO43447 177 aaKnown RBP9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 CYB5R2Q6BCY4 276 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms