RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 NICN1Q9BSH3 213 aa7.82□□□□□ -1.16
CCDC58-201ENST00000291458 ANKRD60Q9BZ19 345 aa7.82□□□□□ -1.16
CCDC58-201ENST00000291458 PCDHB16Q9NRJ7 776 aa7.82□□□□□ -1.16
CCDC58-201ENST00000291458 SERTAD4Q9NUC0 356 aa7.82□□□□□ -1.16
CCDC58-201ENST00000291458 GNG12Q9UBI6 72 aa7.82□□□□□ -1.16
CCDC58-201ENST00000291458 A0A1W2PPI3 338 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 C12orf77C9JDV5 145 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 HSD17B6O14756 317 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 SLC31A2O15432 143 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 GPX5O75715 221 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 IGKV1D-33P01593 117 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 IGKV1-33P01594 117 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 TMEM11P17152 192 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 RAB6AP20340 208 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 DYNLT3P51808 116 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 GP2P55259 537 aaKnown RBP7.81□□□□□ -1.16
CCDC58-201ENST00000291458 MADCAM1Q13477 382 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 IRF3Q14653 427 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 GNMTQ14749 295 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 SYT6Q5T7P8 510 aaPredicted RBP7.81□□□□□ -1.16
CCDC58-201ENST00000291458 GLT8D1Q68CQ7 371 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 CCDC144NLQ6NUI1 221 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 ZNF497Q6ZNH5 498 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 MOB3BQ86TA1 216 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 SETD6Q8TBK2 473 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 THRSPQ92748 146 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 Q96M66 194 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 TMEM59Q9BXS4 323 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 CST11Q9H112 138 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 IFT22Q9H7X7 185 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 PLGRKTQ9HBL7 147 aa7.81□□□□□ -1.16
CCDC58-201ENST00000291458 CHMP1AQ9HD42 196 aaPredicted RBP7.81□□□□□ -1.16
CCDC58-201ENST00000291458 A0A087X0M5 115 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 A0A1B0GX30 115 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 FAM90A22PA8MWA6 464 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 NPIPB11E5RHQ5 1161 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 LY6LH3BQJ8 138 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 C15orf65H3BRN8 121 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 H3BUI4 141 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 CCRL2O00421 344 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 SPINT2O43291 252 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 PDCD6O75340 191 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 OR2F2O95006 317 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 ATP6V1G2O95670 118 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 HBZP02008 142 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 MT-ND4P03905 459 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 CD1AP06126 327 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 RCC1P18754 421 aaPredicted RBP7.8□□□□□ -1.16
CCDC58-201ENST00000291458 CRHBPP24387 322 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 HSPA13P48723 471 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 CLDN12P56749 244 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 SIGIRRQ6IA17 410 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 C10orf99Q6UWK7 81 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 MS4A15Q8N5U1 240 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 CREB3L1Q96BA8 519 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 AKR1E2Q96JD6 320 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 RBM14Q96PK6 669 aaKnown RBP7.8□□□□□ -1.16
CCDC58-201ENST00000291458 NEDD4LQ96PU5 975 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 CITED2Q99967 270 aaPredicted RBP7.8□□□□□ -1.16
CCDC58-201ENST00000291458 UQCC2Q9BRT2 126 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 SPACA1Q9HBV2 294 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 GFOD1Q9NXC2 390 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 RCC2Q9P258 522 aaKnown RBP7.8□□□□□ -1.16
CCDC58-201ENST00000291458 MOB4Q9Y3A3 225 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 AK6Q9Y3D8 172 aaKnown RBP7.8□□□□□ -1.16
CCDC58-201ENST00000291458 MGAM2Q2M2H8 2515 aa7.8□□□□□ -1.16
CCDC58-201ENST00000291458 SMIM30A4D0T7 59 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 UCHL1P09936 223 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 SRMP19623 302 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 FUT3P21217 361 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 CALRP27797 417 aaKnown RBP7.79□□□□□ -1.16
CCDC58-201ENST00000291458 HTR2CP28335 458 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 PPP1CCP36873 323 aaKnown RBP7.79□□□□□ -1.16
CCDC58-201ENST00000291458 PAX5Q02548 391 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 UNC119Q13432 240 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 C6orf183Q5T699 404 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 HES5Q5TA89 166 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 C11orf88Q6PI97 169 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 UNQ9370/PRO34162Q6UXP9 181 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 C6orf201Q7Z4U5 140 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 Q8N2B8 174 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 OR5AU1Q8NGC0 362 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 OR52L2PQ8NGH6 319 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 R3HDM4Q96D70 268 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 GFI1Q99684 422 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 SULT4A1Q9BR01 284 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 RSRP1Q9BUV0 290 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 NCOR1P1Q9H4R4 102 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 TAF9BQ9HBM6 251 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 LINC00527Q9UJ94 153 aa7.79□□□□□ -1.16
CCDC58-201ENST00000291458 IGHV1-3A0A0C4DH29 117 aa7.78□□□□□ -1.16
CCDC58-201ENST00000291458 NCBP2LA6PVI3 153 aaKnown RBP7.78□□□□□ -1.16
CCDC58-201ENST00000291458 OOSP1A8MZH6 123 aa7.78□□□□□ -1.16
CCDC58-201ENST00000291458 PRB2P02812 416 aaPredicted RBP7.78□□□□□ -1.16
CCDC58-201ENST00000291458 FAM106CPP0CH98 169 aa7.78□□□□□ -1.16
CCDC58-201ENST00000291458 PF4V1P10720 104 aa7.78□□□□□ -1.16
CCDC58-201ENST00000291458 GZMHP20718 246 aa7.78□□□□□ -1.16
CCDC58-201ENST00000291458 IL3RAP26951 378 aa7.78□□□□□ -1.16
CCDC58-201ENST00000291458 RAB7AP51149 207 aa7.78□□□□□ -1.16
CCDC58-201ENST00000291458 LOXL3P58215 753 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms