RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 MEOX2P50222 304 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 HBG1P69891 147 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 HBG2P69892 147 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 FER1L6-AS2Q96M78 137 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 TMEM222Q9H0R3 208 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-201ENST00000288840 WASF3Q9UPY6 502 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-201ENST00000288840 IFNA10P01566 189 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 SEC11BP0C7V7 166 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 CCL20P78556 96 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 HOXA4Q00056 320 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-201ENST00000288840 ZNF343Q6P1L6 599 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 LYPD6Q86Y78 171 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 UBAC2Q8NBM4 344 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-201ENST00000288840 KLF13Q9Y2Y9 288 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-201ENST00000288840 USF3Q68DE3 2245 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 LILRA1O75019 489 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 YIF1AO95070 293 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 GGNQ86UU5 652 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 FRZBQ92765 325 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 SLC25A22Q9H936 323 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 HSF4Q9ULV5 492 aa13.64□□□□□ -0.23
SMAD6-201ENST00000288840 MT-CO3P00414 261 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 CRYGSP22914 178 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 CFPP27918 469 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 UBE2G2P60604 165 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 LFNGQ8NES3 379 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 LOC102723996A0A087X1L8 192 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 LRRC3CA6NJW4 275 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 SH2D1BO14796 132 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 DFFBO76075 338 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 MT-ND4LP03901 98 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 HEXAP06865 529 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 SNCAP37840 140 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 AESQ08117 197 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 ZNF391Q9UJN7 358 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 H3BQ15 152 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 IFNA4P05014 189 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 HES3Q5TGS1 186 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 SMIM8Q96KF7 97 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 PFDN5Q99471 154 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 OR2D2Q9H210 308 aa13.63□□□□□ -0.23
SMAD6-201ENST00000288840 ARHGAP21Q5T5U3 1957 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 SCAF4O95104 1147 aaKnown RBP13.62□□□□□ -0.23
SMAD6-201ENST00000288840 RPS2P15880 293 aaKnown RBP13.62□□□□□ -0.23
SMAD6-201ENST00000288840 RAB5AP20339 215 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 FGF12P61328 243 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 SPEM2Q0P670 501 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 CEACAM21Q3KPI0 293 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 IFNA1P01562 189 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 HBE1P02100 147 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 GAPDHP04406 335 aaKnown RBP13.62□□□□□ -0.23
SMAD6-201ENST00000288840 MMP9P14780 707 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 MST1LQ2TV78 715 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 OR5B12Q96R08 314 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 ZNF665Q9H7R5 613 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 CRIM1Q9NZV1 1036 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 COL6A6A6NMZ7 2263 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 MPZP25189 248 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 RAB5CP51148 216 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 USF2Q15853 346 aaPredicted RBP13.62□□□□□ -0.23
SMAD6-201ENST00000288840 ZNF766Q5HY98 468 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 SELENOHQ8IZQ5 122 aaKnown RBP13.62□□□□□ -0.23
SMAD6-201ENST00000288840 NTNG2Q96CW9 530 aa13.62□□□□□ -0.23
SMAD6-201ENST00000288840 DANCRP0C864 163 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 CTSSP25774 331 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 SOX8P57073 446 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 DLK1P80370 383 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 ZNF528Q3MIS6 628 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 FAM185AQ8N0U4 392 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 HIST1H2BAQ96A08 127 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 OR2W1Q9Y3N9 320 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 PLCE1Q9P212 2302 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 ZNF705GA8MUZ8 300 aaPredicted RBP13.61□□□□□ -0.23
SMAD6-201ENST00000288840 CYTIPO60759 359 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 PGLYRP1O75594 196 aaPredicted RBP13.61□□□□□ -0.23
SMAD6-201ENST00000288840 CELA3BP08861 270 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 F2RP25116 425 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 G6PCP35575 357 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 PPP1CBP62140 327 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 PRAMEF6Q5VXH4 476 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 GPR146Q96CH1 333 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 OPA3Q9H6K4 179 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 HEYLQ9NQ87 328 aaPredicted RBP13.61□□□□□ -0.23
SMAD6-201ENST00000288840 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 CDS2O95674 445 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 PMELP40967 661 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 RND3P61587 244 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 DHRS7BQ6IAN0 325 aaPredicted RBP13.61□□□□□ -0.23
SMAD6-201ENST00000288840 H2BFWTQ7Z2G1 175 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 SNIP1Q8TAD8 396 aaKnown RBP13.61□□□□□ -0.23
SMAD6-201ENST00000288840 SLC25A40Q8TBP6 338 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 Q9N2K0 584 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 PSG11Q9UQ72 335 aa13.61□□□□□ -0.23
SMAD6-201ENST00000288840 SYNGR2O43760 224 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 OR4F5Q8NH21 305 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 MSI2Q96DH6 328 aaKnown RBP13.6□□□□□ -0.23
SMAD6-201ENST00000288840 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms