RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 RTN4IP1Q8WWV3 396 aaPredicted RBP11.08□□□□□ -0.64
TPM1-202ENST00000288398 RDH12Q96NR8 316 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 SLC29A1Q99808 456 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 ABCG5Q9H222 651 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 ETAA1Q9NY74 926 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 MRPS28Q9Y2Q9 187 aaKnown RBP11.08□□□□□ -0.64
TPM1-202ENST00000288398 RAMP3O60896 148 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 EBI3Q14213 229 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 SMN1Q16637 294 aaKnown RBP11.07□□□□□ -0.64
TPM1-202ENST00000288398 Q499Y3 187 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 YIF1BQ5BJH7 314 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 AWAT2Q6E213 333 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 XAF1Q6GPH4 301 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 C11orf87Q6NUJ2 197 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 ZNF497Q6ZNH5 498 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 APH1BQ8WW43 257 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 GHSRQ92847 366 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 MRPS24Q96EL2 167 aaKnown RBP11.07□□□□□ -0.64
TPM1-202ENST00000288398 DUX3Q96PT4 197 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 KCNIP1Q9NZI2 227 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 ZNF581Q9P0T4 197 aa11.07□□□□□ -0.64
TPM1-202ENST00000288398 SIRT4Q9Y6E7 314 aaPredicted RBP11.07□□□□□ -0.64
TPM1-202ENST00000288398 C15orf65H3BRN8 121 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 MT-ND4P03905 459 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 ELANEP08246 267 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 OR5H8P0DN80 308 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 SOX6P35712 828 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 TAS2R43P59537 309 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 FOXE3Q13461 319 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 SYT6Q5T7P8 510 aaPredicted RBP11.06□□□□□ -0.64
TPM1-202ENST00000288398 RAB12Q6IQ22 244 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 GLIPR1L1Q6UWM5 242 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 SETD9Q8NE22 299 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 OR10V1Q8NGI7 309 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 OR13C5Q8NGS8 318 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 CYGBQ8WWM9 190 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 TFAP2CQ92754 450 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 MUL1Q969V5 352 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 TMEM80Q96HE8 168 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 S1PR3Q99500 378 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 P2RX4Q99571 388 aa11.06□□□□□ -0.64
TPM1-202ENST00000288398 DIMT1Q9UNQ2 313 aaKnown RBP11.06□□□□□ -0.64
TPM1-202ENST00000288398 OGG1O15527 345 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 CA11O75493 328 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 RPLP1P05386 114 aaKnown RBP11.05□□□□□ -0.64
TPM1-202ENST00000288398 C9orf66Q5T8R8 295 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 TTC23Q5W5X9 447 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 TMEM65Q6PI78 240 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 LCNL1Q6ZST4 164 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 SLC25A48Q6ZT89 311 aaKnown RBP11.05□□□□□ -0.64
TPM1-202ENST00000288398 Q8N6K4 173 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 Q8N9W7 124 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 OR4K15Q8NH41 348 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 THRSPQ92748 146 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 ORAI1Q96D31 301 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 RAX2Q96IS3 184 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 DCLRE1BQ9H816 532 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 PEX16Q9Y5Y5 336 aa11.05□□□□□ -0.64
TPM1-202ENST00000288398 TRBV5-5A0A0J9YX44 114 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 A0A1W2PP11 408 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 LINC01548A6NM66 108 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 C12orf77C9JDV5 145 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 H0YHG0 523 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 WBP4O75554 376 aaKnown RBP11.04□□□□□ -0.64
TPM1-202ENST00000288398 CRTAPO75718 401 aaPredicted RBP11.04□□□□□ -0.64
TPM1-202ENST00000288398 HBZP02008 142 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 MAS1P04201 325 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 FSTP19883 344 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 CAPGP40121 348 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
TPM1-202ENST00000288398 KIR2DS1Q14954 304 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 MMDQ15546 238 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 ZFP41Q8N8Y5 198 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 WWC2-AS2Q96NR7 200 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 SELENOIQ9C0D9 397 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 OR2S2Q9NQN1 319 aa11.04□□□□□ -0.64
TPM1-202ENST00000288398 ZNF107Q9UII5 783 aaPredicted RBP11.04□□□□□ -0.64
TPM1-202ENST00000288398 PNMA8CA0A1B0GUJ8 204 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 A0A1W2PPK0 400 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 FAM90A10PA6NDY2 464 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 FAM90A7PA6NKC0 464 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 FAM90A23PA8MXZ1 464 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 SEC14L6B5MCN3 397 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 MYL12BO14950 172 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 GPX5O75715 221 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 RGS11O94810 467 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 NHLRC4P0CG21 123 aaPredicted RBP11.03□□□□□ -0.64
TPM1-202ENST00000288398 MGMTP16455 207 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 IGFBP3P17936 291 aaPredicted RBP11.03□□□□□ -0.64
TPM1-202ENST00000288398 FUT3P21217 361 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 MYF6P23409 242 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 MAPK3P27361 379 aaPredicted RBP11.03□□□□□ -0.64
TPM1-202ENST00000288398 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 STEAP3Q658P3 488 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 DMKNQ6E0U4 476 aaPredicted RBP11.03□□□□□ -0.64
TPM1-202ENST00000288398 CDH26Q8IXH8 852 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 NKAIN3Q8N8D7 197 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 TMEM104Q8NE00 496 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms