RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PSMF1Q92530 271 aa11.03□□□□□ -0.64
C9orf3-201ENST00000277198 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-201ENST00000277198 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
C9orf3-201ENST00000277198 KIAA1456Q9P272 454 aa11.03□□□□□ -0.64
C9orf3-201ENST00000277198 LRP5LA4QPB2 252 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 FAM24AA6NFZ4 105 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF724A8MTY0 619 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 TRAPPC2LH3BP13 241 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 S100A6P06703 90 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 SNRNP70P08621 437 aaKnown RBP11.02□□□□□ -0.65
C9orf3-201ENST00000277198 ATP6V0CP27449 155 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 PDCD1Q15116 288 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 EIF2S3LQ2VIR3 472 aaKnown RBP11.02□□□□□ -0.65
C9orf3-201ENST00000277198 TMEM182Q6ZP80 229 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF818PQ6ZRF7 136 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 LINC00696Q6ZRV3 163 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 GAPTQ8N292 157 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 FAM213BQ8TBF2 198 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 C2CD4CQ8TF44 421 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 HIST1H2AAQ96QV6 131 aa11.02□□□□□ -0.65
C9orf3-201ENST00000277198 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.65
C9orf3-201ENST00000277198 IGSF23A1L1A6 192 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 PCP4L1A6NKN8 68 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SMIM6P0DI80 62 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SULT1A1P50225 295 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 LHX2P50458 406 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SOX8P57073 446 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
C9orf3-201ENST00000277198 RNPS1Q15287 305 aaKnown RBP11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SOHLH1Q5JUK2 328 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SP5Q6BEB4 398 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SLAMF9Q96A28 289 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SIGLEC12Q96PQ1 595 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 LRFN1Q9P244 771 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 METTL1Q9UBP6 276 aaKnown RBP11.01□□□□□ -0.65
C9orf3-201ENST00000277198 RTTNQ86VV8 2226 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 PINLYPA6NC86 204 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 OR5B21A6NL26 309 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 ADAM20O43506 726 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SYNGR4O95473 234 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 SCTP09683 121 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 RAB5AP20339 215 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 GPM6AP51674 278 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 RAB2AP61019 212 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 IL24Q13007 206 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 HERPUD1Q15011 391 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 HIKESHIQ53FT3 197 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 ETV3LQ6ZN32 361 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 C1QL4Q86Z23 238 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 ZFP82Q8N141 532 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 LILRB1Q8NHL6 650 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-201ENST00000277198 RBMXL1Q96E39 390 aaKnown RBP11.01□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF703Q9H7S9 590 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-201ENST00000277198 PLA2G3Q9NZ20 509 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 MTCH1Q9NZJ7 389 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 FBXO7Q9Y3I1 522 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 MPC1Q9Y5U8 109 aa11.01□□□□□ -0.65
C9orf3-201ENST00000277198 A0A1B0GU03 582 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 C5orf49A4QMS7 147 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 RBFOX3A6NFN3 312 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 DFFBO76075 338 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 HBE1P02100 147 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 UQCRFS1P47985 274 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 CLDN18P56856 261 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 B2MP61769 119 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 SNRPEP62304 92 aaKnown RBP11□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF880Q6PDB4 577 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF573Q86YE8 665 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 SUMF2Q8NBJ7 301 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 OR2M7Q8NG81 312 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 OR5C1Q8NGR4 320 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 TMEM171Q8WVE6 324 aa11□□□□□ -0.65
C9orf3-201ENST00000277198 NPIPB11E5RHQ5 1161 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 SSSCA1O60232 199 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 PGLYRP1O75594 196 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 EIF3GO75821 320 aaKnown RBP eCLIP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 F2RP25116 425 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 PPP1CCP36873 323 aaKnown RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 TLE4Q04727 773 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 PLP2Q04941 152 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 AKIRIN2Q53H80 203 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 CXorf66Q5JRM2 361 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 CD300LFQ8TDQ1 290 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 POM121L2Q96KW2 1035 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 FGF23Q9GZV9 251 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 ABI3Q9P2A4 366 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 SHANK1Q9Y566 2161 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 ASH1LQ9NR48 2969 aaKnown RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 USP9XQ93008 2570 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 A0A087WWC5 75 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 CD300LBA8K4G0 201 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 WRBO00258 174 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 NEURL1O76050 574 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 HSPB1P04792 205 aaKnown RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 S100A9P06702 114 aaKnown RBP10.99□□□□□ -0.65
C9orf3-201ENST00000277198 SPSB3Q6PJ21 355 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 IGFL3Q6UXB1 125 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 PLPPR1Q8TBJ4 325 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 NEK7Q8TDX7 302 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms