RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 OR2F2O95006 317 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 MPIG6BO95866 241 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 HSMCR30P0CW71 290 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 RCC1P18754 421 aaPredicted RBP11.5□□□□□ -0.57
HMGN3-201ENST00000275036 FUT3P21217 361 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 MNDAP41218 407 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 ARHGDIBP52566 201 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 MADCAM1Q13477 382 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 HSD17B12Q53GQ0 312 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 DRAM1Q8N682 238 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 DTX3Q8N9I9 347 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 OR56B4Q8NH76 319 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 CNBD2Q96M20 576 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 CCDC90BQ9GZT6 254 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 GHRLQ9UBU3 117 aa11.5□□□□□ -0.57
HMGN3-201ENST00000275036 G3V4G9 280 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 SDCBPO00560 298 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-201ENST00000275036 SLC22A1O15245 554 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 SLC31A2O15432 143 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 ATP6V1G2O95670 118 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 SNRNP70P08621 437 aaKnown RBP11.49□□□□□ -0.57
HMGN3-201ENST00000275036 CPEP16870 476 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 VDAC2P45880 294 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-201ENST00000275036 HSPA13P48723 471 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 QRFPP83859 136 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 MLLT11Q13015 90 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-201ENST00000275036 UNC119Q13432 240 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 ABCA11PQ4W5N1 156 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 ARSJQ5FYB0 599 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-201ENST00000275036 GLT8D1Q68CQ7 371 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 LINC00311Q8N616 119 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 OR10X1Q8NGY0 326 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 OR1L1Q8NH94 360 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 CITED2Q99967 270 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-201ENST00000275036 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 TRAPPC2LQ9UL33 140 aa11.49□□□□□ -0.57
HMGN3-201ENST00000275036 PDCD6O75340 191 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 FBXO24O75426 580 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 HBZP02008 142 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 OPN1MWP04001 364 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 GLAP06280 429 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 LPLP06858 475 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 UBBP0CG47 229 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 OPN1MW2P0DN77 364 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 OPN1MW3P0DN78 364 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 CHATP28329 748 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 HTR2CP28335 458 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 REG1BP48304 166 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 RPS27AP62979 156 aaKnown RBP11.48□□□□□ -0.57
HMGN3-201ENST00000275036 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 THNSL2Q86YJ6 484 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 ZNF439Q8NDP4 499 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 MRPL30Q8TCC3 161 aaKnown RBP11.48□□□□□ -0.57
HMGN3-201ENST00000275036 MGLLQ99685 303 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 SULT4A1Q9BR01 284 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 NICN1Q9BSH3 213 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 CST11Q9H112 138 aa11.48□□□□□ -0.57
HMGN3-201ENST00000275036 A0A0A6YYD4 124 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 TMEM14DPA8MWL7 114 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 H3BUI4 141 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 HSD17B6O14756 317 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 RAB7AP51149 207 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 ZNF134P52741 427 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 FABP5Q01469 135 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 ZNF816Q0VGE8 651 aaPredicted RBP11.47□□□□□ -0.57
HMGN3-201ENST00000275036 BEAN1Q3B7T3 259 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 TCTEX1D4Q5JR98 221 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 NKAPLQ5M9Q1 402 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 SAMD5Q5TGI4 173 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 Q6ZPA2 131 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 OR8H3Q8N146 312 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 PRR18Q8N4B5 295 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 C8orf31Q8N9H6 132 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 OR10V1Q8NGI7 309 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 ST6GALNAC6Q969X2 333 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
HMGN3-201ENST00000275036 AKR1E2Q96JD6 320 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 TM2D1Q9BX74 207 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 TMEM59Q9BXS4 323 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 MBNL3Q9NUK0 354 aaKnown RBP11.47□□□□□ -0.57
HMGN3-201ENST00000275036 RAB26Q9ULW5 256 aa11.47□□□□□ -0.57
HMGN3-201ENST00000275036 AK6Q9Y3D8 172 aaKnown RBP11.47□□□□□ -0.57
HMGN3-201ENST00000275036 IGHV3-72A0A0B4J1Y9 119 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 IGHV1-3A0A0C4DH29 117 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 CCRL2O00421 344 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 SPINT2O43291 252 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 PEX14O75381 377 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 CA11O75493 328 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 IGKV1D-33P01593 117 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 IGKV1-33P01594 117 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 HNF4GQ14541 408 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 P2RY14Q15391 338 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 TBCEQ15813 527 aaPredicted RBP11.46□□□□□ -0.57
HMGN3-201ENST00000275036 SSX1Q16384 188 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms