RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 TUSC2O75896 110 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
TRIM23-202ENST00000274327 AKR1C4P17516 323 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 CTRB1P17538 263 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 PI3P19957 117 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 AADACP22760 399 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 FGL1Q08830 312 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 C2orf68Q2NKX9 166 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 FAM201AQ5SY85 155 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 TEX36Q5VZQ5 186 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 CTRB2Q6GPI1 263 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 LPCAT3Q6P1A2 487 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 TGIF2LYQ8IUE0 185 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 SNX22Q96L94 193 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 AIFM2Q9BRQ8 373 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 DYNLRB1Q9NP97 96 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 TRAPPC2LQ9UL33 140 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 PCDHB10Q9UN67 800 aa12.16□□□□□ -0.46
TRIM23-202ENST00000274327 RAI1Q7Z5J4 1906 aaPredicted RBP12.15□□□□□ -0.46
TRIM23-202ENST00000274327 TRBV6-7A0A0A0MS04 114 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 NPIPB11E5RHQ5 1161 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 SFT2D2O95562 160 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 PPYP01298 95 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 NMBP08949 121 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 ZNF728P0DKX0 622 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 RPS2P15880 293 aaKnown RBP12.15□□□□□ -0.46
TRIM23-202ENST00000274327 IL13RA1P78552 427 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 STUMQ69YW2 141 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 MUC15Q8N387 334 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
TRIM23-202ENST00000274327 C14orf166Q9Y224 244 aaKnown RBP12.15□□□□□ -0.46
TRIM23-202ENST00000274327 TRAV39A0A0B4J263 110 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 TK1P04183 234 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 FGF2P09038 288 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 IRF2P14316 349 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 CD34P28906 385 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 GABRA2P47869 451 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 SUPT4H1P63272 117 aaKnown RBP12.14□□□□□ -0.47
TRIM23-202ENST00000274327 AESQ08117 197 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 FAM122CQ6P4D5 195 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 PPP1R35Q8TAP8 253 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 SDSLQ96GA7 329 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 RSRP1Q9BUV0 290 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 SLC25A32Q9H2D1 315 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 OOEPA6NGQ2 149 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 K7N7A8 449 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 DUS4LO95620 317 aaKnown RBP12.14□□□□□ -0.47
TRIM23-202ENST00000274327 DIRAS3O95661 229 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 MUC1P15941 1255 aaPredicted RBP12.14□□□□□ -0.47
TRIM23-202ENST00000274327 FXYD4P59646 89 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 HERV-K104P61576 105 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 SRSF4Q08170 494 aaKnown RBP12.14□□□□□ -0.47
TRIM23-202ENST00000274327 KIAA2026Q5HYC2 2103 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 KRBOX4Q5JUW0 171 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 PDZD9Q8IXQ8 264 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 H1FOOQ8IZA3 346 aaPredicted RBP12.14□□□□□ -0.47
TRIM23-202ENST00000274327 TOMM40LQ969M1 308 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 KIRREL1Q96J84 757 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 CHIAQ9BZP6 476 aa12.14□□□□□ -0.47
TRIM23-202ENST00000274327 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 LRRC30A6NM36 301 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 MGST3O14880 152 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 HLA-GP17693 338 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 IGFBP2P18065 325 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 VAMP1P23763 118 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 UBA52P62987 128 aaKnown RBP12.13□□□□□ -0.47
TRIM23-202ENST00000274327 CLEC18BQ6UXF7 455 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 ZNF561Q8N587 486 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 TAF9BQ9HBM6 251 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
TRIM23-202ENST00000274327 SMG1Q96Q15 3661 aaKnown RBP12.13□□□□□ -0.47
TRIM23-202ENST00000274327 A0A0D9SG52 128 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 CRYM-AS1A6NIL9 109 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 DBX1A6NMT0 343 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 TMEM178BH3BS89 294 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 LGALS8O00214 317 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 GOSR2O14653 212 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 PRB1P04280 392 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 GLIPR1P48060 266 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 ZNF345Q14585 488 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 ZNF788Q6ZQV5 615 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 C1orf87Q8N0U7 546 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 GAFA1Q96PS6 74 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 PHB2Q99623 299 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 NCOR1P1Q9H4R4 102 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
TRIM23-202ENST00000274327 SPTBN1Q01082 2364 aaKnown RBP12.12□□□□□ -0.47
TRIM23-202ENST00000274327 C12orf77C9JDV5 145 aa12.11□□□□□ -0.47
TRIM23-202ENST00000274327 CD8AP01732 235 aa12.11□□□□□ -0.47
TRIM23-202ENST00000274327 PPOXP50336 477 aa12.11□□□□□ -0.47
TRIM23-202ENST00000274327 H2BFSP57053 126 aa12.11□□□□□ -0.47
TRIM23-202ENST00000274327 LY6G6FQ5SQ64 297 aa12.11□□□□□ -0.47
TRIM23-202ENST00000274327 ZNRF1Q8ND25 227 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms