RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CHD3Q12873 2000 aaKnown RBP13.95□□□□□ -0.18
CCDC40-201ENST00000269318 IGF2RP11717 2491 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 DPRXA6NFQ7 191 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 CDS2O95674 445 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 MBPP02686 304 aaPredicted RBP13.94□□□□□ -0.18
CCDC40-201ENST00000269318 PSG2P11465 335 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 GATA4P43694 442 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 ESCO2Q56NI9 601 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 WFDC8Q8IUA0 241 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 RND1Q92730 232 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 UBE2J1Q9Y385 318 aaPredicted RBP13.94□□□□□ -0.18
CCDC40-201ENST00000269318 TLN1Q9Y490 2541 aaKnown RBP13.94□□□□□ -0.18
CCDC40-201ENST00000269318 C12orf77C9JDV5 145 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 F5H0A9 414 aaPredicted RBP13.94□□□□□ -0.18
CCDC40-201ENST00000269318 H0Y980 276 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 ZNF737O75373 536 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 LHBP01229 141 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 WNT2P09544 360 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 RRASP10301 218 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 PRDX2P32119 198 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 SSX8Q7RTT4 187 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 MOGAT3Q86VF5 341 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 FOXRED2Q8IWF2 684 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 SELENOHQ8IZQ5 122 aaKnown RBP13.94□□□□□ -0.18
CCDC40-201ENST00000269318 OR52M1Q8NGK5 317 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 STOML3Q8TAV4 291 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 ITLN1Q8WWA0 313 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 PHYHIPLQ96FC7 376 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 PARP12Q9H0J9 701 aaKnown RBP13.94□□□□□ -0.18
CCDC40-201ENST00000269318 CYTL1Q9NRR1 136 aa13.94□□□□□ -0.18
CCDC40-201ENST00000269318 IGKV1D-17A0A075B6S4 117 aa13.93□□□□□ -0.18
CCDC40-201ENST00000269318 OOEPA6NGQ2 149 aa13.93□□□□□ -0.18
CCDC40-201ENST00000269318 TNFSF12O43508 249 aa13.93□□□□□ -0.18
CCDC40-201ENST00000269318 F2RP25116 425 aa13.93□□□□□ -0.18
CCDC40-201ENST00000269318 NUP62P37198 522 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-201ENST00000269318 SELENOVP59797 346 aa13.93□□□□□ -0.18
CCDC40-201ENST00000269318 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
CCDC40-201ENST00000269318 KCNIP1Q9NZI2 227 aa13.93□□□□□ -0.18
CCDC40-201ENST00000269318 K7EPK0 472 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 ABCD4O14678 606 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 HSPA12AO43301 675 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 IGHV1-46P01743 117 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 HKR1P10072 659 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 COMMD7Q86VX2 200 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 ZNF695Q8IW36 515 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 FAM71E2Q8N5Q1 922 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 OR5D13Q8NGL4 314 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 OR4D5Q8NGN0 318 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 DUXBA0A1W2PPF3 345 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 CEACAM6P40199 344 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 GABRA2P47869 451 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 GLIPR1P48060 266 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 BSPH1Q075Z2 132 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 KRBOX4Q5JUW0 171 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 IL22RA2Q969J5 263 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 AKR1E2Q96JD6 320 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 TOLLIPQ9H0E2 274 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 IL19Q9UHD0 177 aa13.92□□□□□ -0.18
CCDC40-201ENST00000269318 LSM5Q9Y4Y9 91 aaKnown RBP13.92□□□□□ -0.18
CCDC40-201ENST00000269318 NKX2-6A6NCS4 301 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 SCGB1D2O95969 90 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 HBZP02008 142 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 S100GP29377 79 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 KLRB1Q12918 225 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 SMCO1Q147U7 214 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 RBPMSQ93062 196 aaKnown RBP13.91□□□□□ -0.18
CCDC40-201ENST00000269318 GALMQ96C23 342 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 CXorf58Q96LI9 332 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 SLC25A32Q9H2D1 315 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 MED9Q9NWA0 146 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 ZDHHC8Q9ULC8 765 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 NMSQ5H8A3 153 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 OR13A1Q8NGR1 328 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 MRGPRDQ8TDS7 321 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 LURAP1Q96LR2 239 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 DNTTIP1Q9H147 329 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 GCM1Q9NP62 436 aa13.91□□□□□ -0.18
CCDC40-201ENST00000269318 SPTBN4Q9H254 2564 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 IGHV3OR15-7A0A075B7D8 119 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 TRGV8A0A0C4DH27 118 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 CLEC18AA5D8T8 446 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 OR8U9P0C7N5 309 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 VDAC1P21796 283 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 RPL12P30050 165 aaKnown RBP13.9□□□□□ -0.18
CCDC40-201ENST00000269318 TNFAIP6P98066 277 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-201ENST00000269318 ADIPOQQ15848 244 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 FAM74A1Q5RGS3 127 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 TPRX1Q8N7U7 411 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 BOLLQ8N9W6 283 aaKnown RBP13.9□□□□□ -0.18
CCDC40-201ENST00000269318 CLEC18CQ8NCF0 446 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 OR8U1Q8NH10 309 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 WFIKKN1Q96NZ8 548 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 ZFP57Q9NU63 452 aa13.9□□□□□ -0.18
CCDC40-201ENST00000269318 E5RGE8 158 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 TPT1P13693 172 aaKnown RBP13.89□□□□□ -0.19
CCDC40-201ENST00000269318 CA7P43166 264 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 FAM53AQ6NSI3 398 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-201ENST00000269318 OR52L2PQ8NGH6 319 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 OR51H1Q8NH63 302 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 FAM222BQ8WU58 562 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms