RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 RFPL3SP0C7P2 107 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 FCGR2AP12318 317 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 DSCR4P56555 118 aaPredicted RBP13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ZNF506Q5JVG8 444 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 FAM185AQ8N0U4 392 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 FAAP24Q9BTP7 215 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 MOB1AQ9H8S9 216 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 PNRC2Q9NPJ4 139 aaKnown RBP13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ZNF581Q9P0T4 197 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 PTPRBP23467 1997 aa13.72□□□□□ -0.21
MAP1LC3B-201ENST00000268607 FAM230AA0A1W2PPH8 454 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 NPIPA2E9PIF3 369 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 NPIPA3F8WFD2 350 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 TGOLN2O43493 480 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 EPHA1P21709 976 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 RUNX1Q01196 453 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 PMS2P11Q13670 270 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ZNF266Q14584 549 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 MEX3BQ6ZN04 569 aaKnown RBP13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 ADPRHL1Q8NDY3 354 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 CLDND2Q8NHS1 167 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 MSI2Q96DH6 328 aaKnown RBP13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 SRXN1Q9BYN0 137 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 SLC2A9Q9NRM0 540 aa13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 TPRP12270 2363 aaKnown RBP13.71□□□□□ -0.21
MAP1LC3B-201ENST00000268607 RND2P52198 227 aa13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 EIF3IQ13347 325 aaKnown RBP13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 HIST3H3Q16695 136 aa13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZNF705AQ6ZN79 300 aaPredicted RBP13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 DOK3Q7L591 496 aa13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 DTX1Q86Y01 620 aa13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 MRPL41Q8IXM3 137 aaKnown RBP13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PIGTQ969N2 578 aa13.71□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NCKAP5O14513 1909 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 FAM221AA4D161 298 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM210A6NLX4 147 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PHF1O43189 567 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TLX3O43711 291 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CA11O75493 328 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TRAPPC6AO75865 159 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CST2P09228 141 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 MMP9P14780 707 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ALDH3B1P43353 468 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PRSS12P56730 875 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TRBV24-1A0A075B6N3 115 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CD55P08174 381 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 BPIFB3P59826 476 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 IQCJQ1A5X6 159 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 WDR25Q64LD2 544 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SLC16A14Q7RTX9 510 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM123Q8N131 208 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LGI3Q8N145 548 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 DYRK2Q92630 601 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 WFIKKN1Q96NZ8 548 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SIGLEC12Q96PQ1 595 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TM2D1Q9BX74 207 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GPR173Q9NS66 373 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 DEPPQ9NTK1 212 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GAB2Q9UQC2 676 aa13.7□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SLC33A1O00400 549 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SCGB1D1O95968 90 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 RAB11AP62491 216 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SP5Q6BEB4 398 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZNF573Q86YE8 665 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM217Q8N7C4 229 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LRTM2Q8N967 370 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OR8G5Q8NG78 346 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OR5C1Q8NGR4 320 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SH2D2AQ9NP31 389 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NECAP2Q9NVZ3 263 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 V9GYS6 101 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 A0A1B0GU03 582 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 B4DEV8 164 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CBR3O75828 277 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CST7O76096 145 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CYC1P08574 325 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 IRF2P14316 349 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 FAHP16930 419 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NTF4P34130 210 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ELLP55199 621 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 BRICD5Q6PL45 260 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMPRSS7Q7RTY8 843 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LYZL4Q96KX0 146 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CALHM2Q9HA72 323 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TCF21O43680 179 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 P04436 131 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SELEP16581 610 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CCL1P22362 96 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TAF9Q16594 264 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 C1orf194Q5T5A4 169 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZNF66Q6ZN08 573 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZIC4Q8N9L1 334 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GLRX2Q9NS18 164 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms