RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 C8orf4Q9NR00 106 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 CKLFQ9UBR5 152 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 TRAV8-7A0A075B6U6 113 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 A0A1W2PPE3 182 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 A0A1W2PPK0 400 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 FGF16O43320 207 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ORC5O43913 435 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 TMEM11P17152 192 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ADMP35318 185 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 GNG10P50151 68 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 LOXL3P58215 753 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ZNF816Q0VGE8 651 aaPredicted RBP7.7□□□□□ -1.18
VPS41-201ENST00000265745 MED21Q13503 144 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 GPR176Q14439 515 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 HES1Q14469 280 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ATAD3CQ5T2N8 411 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ZNF497Q6ZNH5 498 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ZNF329Q86UD4 541 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 LINC00311Q8N616 119 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 C5orf56Q8N8D9 126 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ZFP41Q8N8Y5 198 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 C8orf31Q8N9H6 132 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 OR52M1Q8NGK5 317 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 CCDC107Q8WV48 283 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 ARL11Q969Q4 196 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 MRPS24Q96EL2 167 aaKnown RBP7.7□□□□□ -1.18
VPS41-201ENST00000265745 OR14A2Q96R54 314 aa7.7□□□□□ -1.18
VPS41-201ENST00000265745 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
VPS41-201ENST00000265745 KIAA2026Q5HYC2 2103 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 IGHV1-3A0A0C4DH29 117 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 PSMB11A5LHX3 300 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 EFCAB10A6NFE3 127 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 CCRL2O00421 344 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 HSD17B6O14756 317 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 PIN1P1O15428 100 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 IGKV1D-33P01593 117 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 IGKV1-33P01594 117 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 GAPDHP04406 335 aaKnown RBP7.69□□□□□ -1.18
VPS41-201ENST00000265745 GNAO1P09471 354 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 FSTP19883 344 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 REG1BP48304 166 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 FAM53AQ6NSI3 398 aaPredicted RBP7.69□□□□□ -1.18
VPS41-201ENST00000265745 GLIPR1L1Q6UWM5 242 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 LYPD6Q86Y78 171 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 CDH26Q8IXH8 852 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 GAPTQ8N292 157 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 UBALD1Q8TB05 177 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 MRAPQ8TCY5 172 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 CHPT1Q8WUD6 406 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 MUL1Q969V5 352 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 ST6GALNAC6Q969X2 333 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 NOL4LQ96MY1 436 aaPredicted RBP7.69□□□□□ -1.18
VPS41-201ENST00000265745 SPACA1Q9HBV2 294 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 CNOT2Q9NZN8 540 aaKnown RBP7.69□□□□□ -1.18
VPS41-201ENST00000265745 RCC2Q9P258 522 aaKnown RBP7.69□□□□□ -1.18
VPS41-201ENST00000265745 PSORS1C1Q9UIG5 152 aa7.69□□□□□ -1.18
VPS41-201ENST00000265745 MRPS28Q9Y2Q9 187 aaKnown RBP7.69□□□□□ -1.18
VPS41-201ENST00000265745 DSCAML1Q8TD84 2053 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 IGHV3-72A0A0B4J1Y9 119 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 LINC01548A6NM66 108 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 SERPINE3A8MV23 424 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 C12orf77C9JDV5 145 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 MCRIP1C9JLW8 97 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 AIPO00170 330 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 SDCBPO00560 298 aaPredicted RBP7.68□□□□□ -1.18
VPS41-201ENST00000265745 IGHG2P01859 326 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 CD1AP06126 327 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 CELP19835 753 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 CAPGP40121 348 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 ZNF134P52741 427 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 TAS2R43P59537 309 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 SLC35A2P78381 396 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 DOC2BQ14184 412 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 Q3ZCU0 254 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 TMEM177Q53S58 311 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 KHDC1LQ5JSQ8 128 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 SYT6Q5T7P8 510 aaPredicted RBP7.68□□□□□ -1.18
VPS41-201ENST00000265745 RAB12Q6IQ22 244 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 MOB3BQ86TA1 216 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 STX19Q8N4C7 294 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 JAGN1Q8N5M9 183 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 Q8N6K4 173 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 TMEM104Q8NE00 496 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 NEK7Q8TDX7 302 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 DERL3Q96Q80 235 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 PLSCR3Q9NRY6 295 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 PLCXD1Q9NUJ7 323 aa7.68□□□□□ -1.18
VPS41-201ENST00000265745 IGHV3-43A0A0B4J1X8 118 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 PNMA8CA0A1B0GUJ8 204 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 FAM90A10PA6NDY2 464 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 FAM90A7PA6NKC0 464 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 FAM90A23PA8MXZ1 464 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 SPINT2O43291 252 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 DUS4LO95620 317 aaKnown RBP7.67□□□□□ -1.18
VPS41-201ENST00000265745 MAS1P04201 325 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 GLAP06280 429 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 IGHV3-43DP0DP04 118 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 FUT3P21217 361 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 CD1BP29016 333 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 KRTAP10-11P60412 298 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms