RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 TRIB1Q96RU8 372 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 GDF15Q99988 308 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 MANBALQ9NQG1 85 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 CLN8Q9UBY8 286 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 TMEM30CPA0ZSE6 113 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 NPIPB8E9PQR5 432 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 NPIPB7O75200 414 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 GRPP07492 148 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 P2RY1P47900 373 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 G3V3Y1 287 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 H2BFSP57053 126 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 LSM11P83369 360 aaKnown RBP eCLIP5.05□□□□□ -1.6
VCAN-201ENST00000265077 RUNX2Q13950 521 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 KISS1Q15726 138 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 GFI1BQ5VTD9 330 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 C9orf135Q5VTT2 229 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 TMEM91Q6ZNR0 172 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 TUSC5Q8IXB3 177 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 RNF133Q8WVZ7 376 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 PTX4Q96A99 478 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 NOTCH4Q99466 2003 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 NLRC5Q86WI3 1866 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 TRAV30A0A087WSZ9 112 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 H0YL77 283 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 DMKNQ6E0U4 476 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 ST6GALNAC3Q8NDV1 305 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR10G8Q8NGN5 311 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ATP6V0BQ99437 205 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 MMP25Q9NPA2 562 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 C20orf141Q9NUB4 165 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 DHRS3O75911 302 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 GPR3P46089 330 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 SPACA5Q96QH8 159 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR2A5Q96R48 311 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZNF831Q5JPB2 1677 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 LILRA5A6NI73 299 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 FGF8P55075 233 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 RAE1P78406 368 aaKnown RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 KIRREL2Q6UWL6 708 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 TEX29Q8N6K0 151 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 IDSB3KWA1 339 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 M0QZ24 198 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 UQCRFS1P47985 274 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 LGALS4P56470 323 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 MRGPRGQ86SM5 289 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZNF775Q96BV0 537 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 PMCHL2Q9BQD1 86 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 SRD5A3Q9H8P0 318 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 F2RP25116 425 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 GPM6AP51674 278 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZNF770Q6IQ21 691 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 ALG14Q96F25 216 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 MAGT1Q9H0U3 335 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 CCL27Q9Y4X3 112 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 DSCAML1Q8TD84 2053 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 COX7A2P2O60397 106 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 CD8AP01732 235 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZNF17P17021 662 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR5C1Q8NGR4 320 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ASB5Q8WWX0 329 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 GEMIN7Q9H840 131 aaKnown RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 HES4Q9HCC6 221 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 DNAJB12Q9NXW2 375 aaKnown RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 KCNE1BA0A087WTH5 132 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 MMP9P14780 707 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 B4GALT1P15291 398 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 RHOBP62745 196 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZNF141Q15928 474 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZNF664Q8N3J9 261 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR2A1Q8NGT9 310 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 FGF22Q9HCT0 170 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 MED29Q9NX70 200 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 SPCS1Q9Y6A9 102 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 CEP192Q8TEP8 1941 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 CA1P00915 261 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 AMBPP02760 352 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 RAB9AP51151 201 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 PARM1Q6UWI2 310 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 DMRTC2Q8IXT2 367 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 Q8NFD4 153 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR4S2Q8NH73 311 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 TIMD4Q96H15 378 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ST6GAL1P15907 406 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 PMELP40967 661 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 TMEM249Q2WGJ8 235 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 FBXL14Q8N1E6 418 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR2C3Q8N628 320 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR1F12Q8NHA8 337 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 RDH5Q92781 318 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 JKAMPQ9P055 326 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 ZBTB25P24278 435 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 LAIR2Q6ISS4 152 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 SPACA9Q96E40 222 aaPredicted RBP5.04□□□□□ -1.6
VCAN-201ENST00000265077 RBKSQ9H477 322 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 PIPOXQ9P0Z9 390 aa5.04□□□□□ -1.6
VCAN-201ENST00000265077 OR2W5A6NFC9 320 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 NKX2-2O95096 273 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 CCR5P51681 352 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 B4GALNT1Q00973 533 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms