RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 BCAT2O15382 392 aaPredicted RBP13.11□□□□□ -0.31
CASC3-201ENST00000264645 MPLP40238 635 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 ZNF318Q5VUA4 2279 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 A6NNC1 897 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 CD99P14209 185 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 TNFSF10P50591 281 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 NUTF2P61970 127 aaKnown RBP13.11□□□□□ -0.31
CASC3-201ENST00000264645 RAB30Q15771 203 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 C9orf40Q8IXQ3 194 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 PAQR4Q8N4S7 273 aaPredicted RBP13.11□□□□□ -0.31
CASC3-201ENST00000264645 SPACA9Q96E40 222 aaPredicted RBP13.11□□□□□ -0.31
CASC3-201ENST00000264645 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 LHFPL6Q9Y693 200 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 M0R2Z0 102 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 OR5G3P0C626 314 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 GPR12P47775 334 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 RSPO4Q2I0M5 234 aaPredicted RBP13.11□□□□□ -0.31
CASC3-201ENST00000264645 LINC00114Q6XXX2 140 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 MENTQ9BUN1 341 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 CISD1Q9NZ45 108 aaKnown RBP13.11□□□□□ -0.31
CASC3-201ENST00000264645 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 A0A1B0GU03 582 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 IRF2P14316 349 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 IGFBP3P17936 291 aaPredicted RBP13.11□□□□□ -0.31
CASC3-201ENST00000264645 PRDX4Q13162 271 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 ELSPBP1Q96BH3 223 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 GALMQ96C23 342 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 P2RX4Q99571 388 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 FAM173AQ9BQD7 235 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 BRS3P32247 399 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 LSM6P62312 80 aaKnown RBP13.1□□□□□ -0.31
CASC3-201ENST00000264645 ARG2P78540 354 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 TMEM164Q5U3C3 297 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 CORO2AQ92828 525 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 SCTP09683 121 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 TAS2R45P59539 299 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 HIST3H3Q16695 136 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 ATP6V1FQ16864 119 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 ATOH7Q8N100 152 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 OR5R1Q8NH85 324 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 OR1L3Q8NH93 324 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 GPBAR1Q8TDU6 330 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 SSMEM1Q8WWF3 244 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 TRIB1Q96RU8 372 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 POLDIP2Q9Y2S7 368 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 COL9A1P20849 921 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 F2RP25116 425 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 RTL8AQ9BWD3 113 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 WIPI2Q9Y4P8 454 aa13.1□□□□□ -0.31
CASC3-201ENST00000264645 MS4A18H0YCH9 400 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 K7ERU9 68 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 RAB29O14966 203 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 AMBPP02760 352 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 SUPT4H1P63272 117 aaKnown RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 SMAD4Q13485 552 aaKnown RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 MS4A18Q3C1V0 323 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 KIAA1644Q3SXP7 199 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 OR4B1Q8NGF8 309 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 OIT3Q8WWZ8 545 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 RCC1LQ96I51 464 aaKnown RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 UQCR10Q9UDW1 63 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 SIP14410 1827 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 ARHGEF17Q96PE2 2063 aaPredicted RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 LNP1A1A4G5 178 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 PIAS2O75928 621 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 KBTBD11O94819 623 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 S100A7P31151 101 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 TFPI2P48307 235 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 RPL24P83731 157 aaKnown RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 ICAM4Q14773 271 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 P2RY6Q15077 328 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 WDR73Q6P4I2 378 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 WFDC1Q9HC57 220 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 RFNGQ9Y644 331 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 CASP8AP2Q9UKL3 1982 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 IGKV1D-43A0A0B4J1Z2 117 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 SRP14P37108 136 aaKnown RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 WNT5AP41221 380 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 HLA-BQ31612 363 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 CLN8Q9UBY8 286 aa13.09□□□□□ -0.31
CASC3-201ENST00000264645 DIDO1Q9BTC0 2240 aaKnown RBP13.09□□□□□ -0.31
CASC3-201ENST00000264645 BMPR1BO00238 502 aa13.08□□□□□ -0.31
CASC3-201ENST00000264645 FCER1GP30273 86 aa13.08□□□□□ -0.31
CASC3-201ENST00000264645 RALGAPA2Q2PPJ7 1873 aa13.08□□□□□ -0.31
CASC3-201ENST00000264645 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.31
CASC3-201ENST00000264645 CLDND2Q8NHS1 167 aa13.08□□□□□ -0.31
CASC3-201ENST00000264645 IFI44Q8TCB0 444 aa13.08□□□□□ -0.31
CASC3-201ENST00000264645 TAF15Q92804 592 aaKnown RBP eCLIP13.08□□□□□ -0.31
CASC3-201ENST00000264645 NUDT16L1Q9BRJ7 211 aaKnown RBP13.08□□□□□ -0.31
CASC3-201ENST00000264645 DOCK9Q9BZ29 2069 aa13.08□□□□□ -0.32
CASC3-201ENST00000264645 DEFB108AA8MXU0 73 aa13.08□□□□□ -0.32
CASC3-201ENST00000264645 M0R1X1 148 aa13.08□□□□□ -0.32
CASC3-201ENST00000264645 OR2D2Q9H210 308 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms