RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LINC00311Q8N616 119 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 C8orf31Q8N9H6 132 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 PHYHIPQ92561 330 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 TRAPPC2LQ9UL33 140 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 TPRKBQ9Y3C4 175 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 SH2D7A6NKC9 451 aaPredicted RBP12.79□□□□□ -0.36
USE1-201ENST00000263897 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 SC5DO75845 299 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 CD37P11049 281 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 SRMP19623 302 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 MYF6P23409 242 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 ZNF816Q0VGE8 651 aaPredicted RBP12.79□□□□□ -0.36
USE1-201ENST00000263897 Q3ZCU0 254 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 C1orf100Q5SVJ3 147 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
USE1-201ENST00000263897 CEACAM19Q7Z692 300 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 OR4K15Q8NH41 348 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 R3HDM4Q96D70 268 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 MOB4Q9Y3A3 225 aa12.79□□□□□ -0.36
USE1-201ENST00000263897 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 UBE2QL1A1L167 161 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 CCRL2O00421 344 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 HSD17B6O14756 317 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 SPINT2O43291 252 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 UBBP0CG47 229 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 RCC1P18754 421 aaPredicted RBP12.78□□□□□ -0.36
USE1-201ENST00000263897 EBI3Q14213 229 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 HES1Q14469 280 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 HNF4GQ14541 408 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 C9orf152Q5JTZ5 239 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 C6orf183Q5T699 404 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 OR4F17Q8NGA8 305 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 ST6GALNAC6Q969X2 333 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 FAM46BQ96A09 425 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 OR4F4Q96R69 305 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 CST11Q9H112 138 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 RAB9BQ9NP90 201 aa12.78□□□□□ -0.36
USE1-201ENST00000263897 IGHV1-3A0A0C4DH29 117 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 PDCD6O75340 191 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 HBZP02008 142 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 UCHL1P09936 223 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 VSIG8P0DPA2 414 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 TMEM11P17152 192 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 TPBGQ13641 420 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 TMEM30BQ3MIR4 351 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 HSD17B12Q53GQ0 312 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 RBM48Q5RL73 367 aaKnown RBP12.77□□□□□ -0.37
USE1-201ENST00000263897 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 MOB3BQ86TA1 216 aa12.77□□□□□ -0.37
USE1-201ENST00000263897 G3V4G9 280 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 RGS10O43665 173 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 MPIG6BO95866 241 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 IGKV1D-33P01593 117 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 IGKV1-33P01594 117 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 IL3RAP26951 378 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 REG1BP48304 166 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 ZNF134P52741 427 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 CT45A1Q5HYN5 189 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 STEAP3Q658P3 488 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 SLC25A48Q6ZT89 311 aaKnown RBP12.76□□□□□ -0.37
USE1-201ENST00000263897 C5orf56Q8N8D9 126 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 ZNF439Q8NDP4 499 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 OR1L1Q8NH94 360 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 CT45A3Q8NHU0 189 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 UFD1Q92890 307 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 TMEM203Q969S6 136 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 CYYR1Q96J86 154 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 VCX3BQ9H321 246 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 TAF9BQ9HBM6 251 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 ISYNA1Q9NPH2 558 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 MBNL3Q9NUK0 354 aaKnown RBP12.76□□□□□ -0.37
USE1-201ENST00000263897 GNG12Q9UBI6 72 aa12.76□□□□□ -0.37
USE1-201ENST00000263897 TCRBV4S1A1TA0A5B7 111 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 SLC31A2O15432 143 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 FGF16O43320 207 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 HSMCR30P0CW71 290 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 CRHBPP24387 322 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 HTR2CP28335 458 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 RPS27AP62979 156 aaKnown RBP12.75□□□□□ -0.37
USE1-201ENST00000263897 BEAN1Q3B7T3 259 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 SAMD5Q5TGI4 173 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 C10orf99Q6UWK7 81 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 TMEM91Q6ZNR0 172 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 PRR18Q8N4B5 295 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 MRPL30Q8TCC3 161 aaKnown RBP12.75□□□□□ -0.37
USE1-201ENST00000263897 RTN4IP1Q8WWV3 396 aaPredicted RBP12.75□□□□□ -0.37
USE1-201ENST00000263897 EAF1Q96JC9 268 aaPredicted RBP12.75□□□□□ -0.37
USE1-201ENST00000263897 NEDD4LQ96PU5 975 aa12.75□□□□□ -0.37
USE1-201ENST00000263897 KCNIP1Q9NZI2 227 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms