RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 MED12LQ86YW9 2145 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 LY6G6EA0A0G2JKS1 128 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 KLF7O75840 302 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 GLIPR1P48060 266 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 ERVS71-1P61550 626 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 NMSQ5H8A3 153 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 ZNF506Q5JVG8 444 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 TMEM42Q69YG0 159 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 Q6ZRM9 215 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 GGNQ86UU5 652 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 RBMXL1Q96E39 390 aaKnown RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 TMEM56Q96MV1 263 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 FGF23Q9GZV9 251 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 OR14J1Q9UGF5 321 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 RNF150Q9ULK6 438 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 TMEM56-RWDD3S4R434 201 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 U3KQA8 63 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 KIAA1549Q9HCM3 1950 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 KIR2DS1A0A191URI9 304 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 BTBD17A6NE02 478 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 ZNF705GA8MUZ8 300 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 LILRA1O75019 489 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 KIR2DS4P43632 304 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 ZXDAP98168 799 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 KIR2DS1Q14954 304 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 OR8B8Q15620 311 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 LPAL2Q16609 132 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 SPINK9Q5DT21 86 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 SSX7Q7RTT5 188 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 CLDN23Q96B33 292 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 C12orf49Q9H741 205 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 USF3Q68DE3 2245 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 PRR14LQ5THK1 2151 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 PINLYPA6NC86 204 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 PHOX2AO14813 284 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 RNF224P0DH78 156 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 DEFA4P12838 97 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 F2RP25116 425 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 UCP1P25874 307 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 PAX9P55771 341 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 ID3Q02535 119 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 CLN3Q13286 438 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 DAZAP2Q15038 168 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 TUSC5Q8IXB3 177 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 SPEM1Q8N4L4 309 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 SNIP1Q8TAD8 396 aaKnown RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 SF3B5Q9BWJ5 86 aaKnown RBP10.59□□□□□ -0.71
CHMP3-201ENST00000263856 SLC25A22Q9H936 323 aa10.59□□□□□ -0.71
CHMP3-201ENST00000263856 NCOR1O75376 2440 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 LOC102723971A0A1B0GUV8 181 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 A0A1B0GV90 55 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 DFFBO76075 338 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 CLDN1O95832 211 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 CD55P08174 381 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 CELA3AP09093 270 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SRD5A2P31213 254 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 MLF1P58340 268 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 IL24Q13007 206 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 USF2Q15853 346 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-201ENST00000263856 UNQ6494/PRO21346Q6UXR6 183 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 HES7Q9BYE0 225 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SMOC1Q9H4F8 434 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 DEPPQ9NTK1 212 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 AURKAIP1Q9NWT8 199 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SVILO95425 2214 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 OR5H1A6NKK0 313 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 RHBDL1O75783 438 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SELEP16581 610 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 CA6P23280 308 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 GPX4P36969 197 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-201ENST00000263856 FGF12P61328 243 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 ARL16Q0P5N6 197 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 ASCL4Q6XD76 172 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SSX9Q7RTT3 188 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 C1QL4Q86Z23 238 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 PLPPR1Q8TBJ4 325 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SAP25Q8TEE9 199 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 HLA-CQ95604 372 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 PACRGQ96M98 296 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 PCED1AQ9H1Q7 454 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 RBKSQ9H477 322 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 UBE2ZQ9H832 354 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-201ENST00000263856 PLA2G3Q9NZ20 509 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 TRAPPC2LQ9UL33 140 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 LAMP3Q9UQV4 416 aa10.58□□□□□ -0.72
CHMP3-201ENST00000263856 SMCO3A2RU48 225 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF729A6NN14 1252 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-201ENST00000263856 CLDN34H7C241 214 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 BCL2P10415 239 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 PMP22Q01453 160 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 BAXQ07812 192 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 RTP5Q14D33 572 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 LURAP1LQ8IV03 231 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF808Q8N4W9 903 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-201ENST00000263856 LHX4Q969G2 390 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms