RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 LRTM2Q8N967 370 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 LILRB4Q8NHJ6 448 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 RNF126Q9BV68 326 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 RNF7Q9UBF6 113 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 C12orf77C9JDV5 145 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 CFDP00746 253 aaPredicted RBP13.23□□□□□ -0.29
VPS26A-201ENST00000263559 CD80P33681 288 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 CCL8P80075 99 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 NDUFA5Q16718 116 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 LYZL2Q7Z4W2 148 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 FAM219AQ8IW50 185 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 OR1L1Q8NH94 360 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 LHFPL5Q8TAF8 219 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
VPS26A-201ENST00000263559 VRK1Q99986 396 aaPredicted RBP13.23□□□□□ -0.29
VPS26A-201ENST00000263559 OOEPA6NGQ2 149 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 C17orf100A8MU93 164 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 H0YIZ8 118 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 CYB5R3P00387 301 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-201ENST00000263559 IFNA21P01568 189 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 CEACAM6P40199 344 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 IAH1Q2TAA2 248 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-201ENST00000263559 TGIF2LYQ8IUE0 185 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 OR10V1Q8NGI7 309 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 MRGPRDQ8TDS7 321 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 C18orf12Q96KH6 178 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 SEBOXQ9HB31 216 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-201ENST00000263559 NDRG3Q9UGV2 375 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 DIDO1Q9BTC0 2240 aaKnown RBP13.22□□□□□ -0.29
VPS26A-201ENST00000263559 E7EQL1 145 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 LGI3Q8N145 548 aa13.22□□□□□ -0.29
VPS26A-201ENST00000263559 PARP12Q9H0J9 701 aaKnown RBP13.22□□□□□ -0.29
VPS26A-201ENST00000263559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-201ENST00000263559 KCNAB3O43448 404 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 TNFSF12O43508 249 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 ADH4P08319 380 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 HTR2BP41595 481 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 RAB32Q13637 225 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
VPS26A-201ENST00000263559 CMTM1Q8IZ96 169 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 ZNRF1Q8ND25 227 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 OR13A1Q8NGR1 328 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 ANGPTL6Q8NI99 470 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 ERGIC1Q969X5 290 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 SNX22Q96L94 193 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 PPP1R3CQ9UQK1 317 aa13.21□□□□□ -0.29
VPS26A-201ENST00000263559 SMG1Q96Q15 3661 aaKnown RBP13.21□□□□□ -0.29
VPS26A-201ENST00000263559 TPRP12270 2363 aaKnown RBP13.21□□□□□ -0.29
VPS26A-201ENST00000263559 MEX3AA1L020 520 aaKnown RBP13.21□□□□□ -0.3
VPS26A-201ENST00000263559 RNF222A6NCQ9 220 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 VSTM5A8MXK1 200 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 HBZP02008 142 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 LUMP51884 338 aaPredicted RBP13.21□□□□□ -0.3
VPS26A-201ENST00000263559 TLE1Q04724 770 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 EXOSC2Q13868 293 aaKnown RBP13.21□□□□□ -0.3
VPS26A-201ENST00000263559 EDDM3AQ14507 147 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 Q8TCH9 128 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 FAM222BQ8WU58 562 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 GALMQ96C23 342 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 DIRC2Q96SL1 478 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 DCTN5Q9BTE1 182 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 TMEM222Q9H0R3 208 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 ARID1AO14497 2285 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 KALRNO60229 2985 aa13.21□□□□□ -0.3
VPS26A-201ENST00000263559 PGLYRP1O75594 196 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-201ENST00000263559 PAX5Q02548 391 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 BEX5Q5H9J7 111 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 FAM53AQ6NSI3 398 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-201ENST00000263559 BVESQ8NE79 360 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 LILRB1Q8NHL6 650 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-201ENST00000263559 CA5BP1Q8WTZ4 195 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 DCAF16Q9NXF7 216 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 UBE2J1Q9Y385 318 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-201ENST00000263559 MAB21L2Q9Y586 359 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 RAI1Q7Z5J4 1906 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-201ENST00000263559 A0A0D9SG52 128 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 IGLV2-14P01704 120 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 CD55P08174 381 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 IL2RGP31785 369 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 ACOT7LQ6ZUV0 252 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 DNTTIP1Q9H147 329 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 OR5AC2Q9NZP5 309 aa13.2□□□□□ -0.3
VPS26A-201ENST00000263559 ERVH48-1M5A8F1 160 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 RP2O75695 350 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 OR2F2O95006 317 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 CD3EP07766 207 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 OR8U9P0C7N5 309 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 TNFRSF1AP19438 455 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 SSTR5P35346 364 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 OR2F1Q13607 317 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 ZNF345Q14585 488 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 C6orf183Q5T699 404 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 KCNRGQ8N5I3 272 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 SLC35G3Q8N808 338 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 OR52L2PQ8NGH6 319 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 OR8U1Q8NH10 309 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 PPP1R35Q8TAP8 253 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 DCUN1D4Q92564 292 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 LURAP1Q96LR2 239 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms