RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 GTF3C1Q12789 2109 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 IGHV2OR16-5A0A0B4J2B6 119 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 KIR2DL5BA0A0G2JN68 375 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 KIR2DL5BA0A0G2JPC4 375 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 DUXBA0A1W2PPF3 345 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 HCRTR1O43613 425 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 CD55P08174 381 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 ZNF708P17019 499 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 SLC6A12P48065 614 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 SLC6A9P48067 706 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 PPOXP50336 477 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 PDX1P52945 283 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 SNU13P55769 128 aaKnown RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 MEP1BQ16820 701 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 TMEM177Q53S58 311 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 KIR2DL5AQ8N109 375 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 OR4D5Q8NGN0 318 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 C20orf144Q9BQM9 153 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 NICN1Q9BSH3 213 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 ZNF443Q9Y2A4 671 aaPredicted RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 CSPG4Q6UVK1 2322 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 LTBP2Q14767 1821 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 A0A087WV48 116 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 K7ESF4 209 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 PHF1O43189 567 aaPredicted RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 MT-CO3P00414 261 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 HRASP01112 189 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 FOLR3P41439 243 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 C17orf67Q0P5P2 114 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 PLCXD2Q0VAA5 305 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 TMEM176BQ3YBM2 270 aaPredicted RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 MRPL52Q86TS9 123 aaKnown RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 ZNF695Q8IW36 515 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 FAM89BQ8N5H3 189 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 OR51T1Q8NGJ9 327 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 TMEM170AQ8WVE7 144 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 SFRP2Q96HF1 295 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 RBFOX2O43251 390 aaKnown RBP eCLIP7.31□□□□□ -1.24
LDB3-201ENST00000263066 HSBP1O75506 76 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 CRYBA4P53673 196 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 GFRA1P56159 465 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 CNN3Q15417 329 aaKnown RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 DEFB109BQ30KR1 87 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 TRMT12Q53H54 448 aaKnown RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 MRPL2Q5T653 305 aaKnown RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 KCTD18Q6PI47 426 aaPredicted RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 LINC01551Q86U37 167 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 LRRC25Q8N386 305 aaPredicted RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 TMEM204Q9BSN7 226 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 HHLA2Q9UM44 414 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 RFNGQ9Y644 331 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 CDKN2AP42771 156 aaKnown RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 RAB35Q15286 201 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 ZNF788Q6ZQV5 615 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 TMEM144Q7Z5S9 345 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 MARCH3Q86UD3 253 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 SAXO1Q8IYX7 474 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 AQP3Q92482 292 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 FNDC4Q9H6D8 234 aaPredicted RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 SERTAD4Q9NUC0 356 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 CLCF1Q9UBD9 225 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 TRBV24-1A0A075B6N3 115 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 OR2T8A6NH00 312 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 ZNF253O75346 499 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 POU2F2P09086 479 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 CDKN1AP38936 164 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 SLC6A8P48029 635 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 PAX2Q02962 417 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 LHFPL4Q7Z7J7 247 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 ATP6V0BQ99437 205 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 NAA38Q9BRA0 125 aaKnown RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 NXT1Q9UKK6 140 aaKnown RBP7.31□□□□□ -1.24
LDB3-201ENST00000263066 ST3GAL6Q9Y274 331 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 SIGLEC7Q9Y286 467 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 USF3Q68DE3 2245 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 WNK2Q9Y3S1 2297 aa7.31□□□□□ -1.24
LDB3-201ENST00000263066 AHRRA9YTQ3 701 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 RPL36A-HNRNPH2H7BZ11 118 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 TLX3O43711 291 aaPredicted RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 DBHP09172 617 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ZGLP1P0C6A0 271 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 SLC25A1P53007 311 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ARG2P78540 354 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ZNF154Q13106 437 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ATP1A1-AS1Q5TC04 95 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ABHD17BQ5VST6 288 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 MOB1BQ7L9L4 216 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 SLC16A11Q8NCK7 471 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 FAM174AQ8TBP5 190 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 EMG1Q92979 244 aaKnown RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 COX14Q96I36 57 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 IMMP2LQ96T52 175 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 MS4A8Q9BY19 250 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 GPR35Q9HC97 309 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 FRRS1LQ9P0K9 344 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 NAT8BQ9UHF3 227 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 PILRBQ9UKJ0 227 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 DOCK11Q5JSL3 2073 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms