RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 HIST1H1BP16401 226 aaKnown RBP11.3□□□□□ -0.6
TTC39A-202ENST00000262676 KLF3P57682 345 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-202ENST00000262676 ISXQ2M1V0 245 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 OR4C13Q8NGP0 309 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 ADTRPQ96IZ2 230 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 WDR13Q9H1Z4 485 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 CHODLQ9H9P2 273 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 SPAG17Q6Q759 2223 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 GDF9O60383 454 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 TMEM127O75204 238 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 PDCD6O75340 191 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 ZNF32P17041 273 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 MRPS11P82912 194 aaKnown RBP11.3□□□□□ -0.6
TTC39A-202ENST00000262676 ZNF117Q03924 483 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 TMEM136Q6ZRR5 245 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 SMAD7O15105 426 aaKnown RBP11.3□□□□□ -0.6
TTC39A-202ENST00000262676 CXorf1O96002 111 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-202ENST00000262676 ST6GAL2Q96JF0 529 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 LRRC3BQ96PB8 259 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 STARD10Q9Y365 291 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 CD81P60033 236 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-202ENST00000262676 PLPP2O43688 288 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 PRSS2P07478 247 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 SOD3P08294 240 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
TTC39A-202ENST00000262676 COL4A5P29400 1685 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 ROM1Q03395 351 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 GPBAR1Q8TDU6 330 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 TSPAN32Q96QS1 320 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 DMRTA2Q96SC8 542 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 CXXC4Q9H2H0 198 aa11.3□□□□□ -0.6
TTC39A-202ENST00000262676 ADAMTSL1Q8N6G6 1762 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 KBTBD11O94819 623 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 ZFPL1O95159 310 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
TTC39A-202ENST00000262676 RHBDD2Q6NTF9 364 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 ADAD2Q8NCV1 583 aaKnown RBP11.29□□□□□ -0.6
TTC39A-202ENST00000262676 NTMQ9P121 344 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 CGB1A6NKQ9 187 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 SLC23A3Q6PIS1 610 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 GAPTQ8N292 157 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 CNRIP1Q96F85 164 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-202ENST00000262676 IGKV3OR2-268A0A0C4DH90 116 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 CXorf65A6NEN9 183 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 TRDCB7Z8K6 153 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 NPBWR2P48146 333 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 PPP1R17O96001 155 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 IGHV4-34P06331 123 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 KIR3DL2P43630 455 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-202ENST00000262676 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 SIRT5Q9NXA8 310 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 EXOGQ9Y2C4 368 aaKnown RBP11.29□□□□□ -0.6
TTC39A-202ENST00000262676 MAGEA5P43359 124 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 TFPI2P48307 235 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 LGALSLQ3ZCW2 172 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-202ENST00000262676 ZNF506Q5JVG8 444 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 OIT3Q8WWZ8 545 aa11.29□□□□□ -0.6
TTC39A-202ENST00000262676 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-202ENST00000262676 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 NSUN5P2Q63ZY6 315 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 A0A0A6YYD5 115 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 CXCL3P19876 107 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 MAS1LP35410 378 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 GUCA2BQ16661 112 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 PTPMT1Q8WUK0 201 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 MRPL24Q96A35 216 aaKnown RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 C4orf45Q96LM5 186 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 DPH3P1Q9H4G8 78 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 SUMO3P55854 103 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 CACNG7P62955 275 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 ATP1A1-AS1Q5TC04 95 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 FHL5Q5TD97 284 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 RNF133Q8WVZ7 376 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 ZNF275Q9NSD4 429 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 RCC2Q9P258 522 aaKnown RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 CTSVO60911 334 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 CTSDP07339 412 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 KCNMB1Q16558 191 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 FAM53AQ6NSI3 398 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-202ENST00000262676 TMEM38BQ9NVV0 291 aa11.28□□□□□ -0.6
TTC39A-202ENST00000262676 FAM181BA6NEQ2 426 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 SLC25A1P53007 311 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 MFAP2P55001 183 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 LEMD1Q68G75 181 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 MRPL30Q8TCC3 161 aaKnown RBP11.27□□□□□ -0.6
TTC39A-202ENST00000262676 NKG7Q16617 165 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 XAF1Q6GPH4 301 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms