RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 OR5AC1P0C628 307 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 BMP5P22003 454 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 S100A10P60903 97 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 ZNF345Q14585 488 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 Q8NFD4 153 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 DCUN1D4Q92564 292 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 MRPL24Q96A35 216 aaKnown RBP11.52□□□□□ -0.57
VMP1-201ENST00000262291 TOLLIPQ9H0E2 274 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 ZZEF1O43149 2961 aa11.52□□□□□ -0.57
VMP1-201ENST00000262291 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 J3QT63 122 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 M0R1B8 84 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 DEGS1O15121 323 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 TIMM8AO60220 97 aaPredicted RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 CRHP06850 196 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 PJVKQ0ZLH3 352 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 MST1LQ2TV78 715 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 TMEM211Q6ICI0 200 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 DHRS11Q6UWP2 260 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 C22orf34Q6ZV56 151 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 LRP11Q86VZ4 500 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 SGPP2Q8IWX5 399 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 SAXO1Q8IYX7 474 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 FAM24BQ8N5W8 94 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 C15orf54Q8N8G6 183 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 SECTM1Q8WVN6 248 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 NXPH2O95156 264 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 ARG1P05089 322 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 CTSDP07339 412 aaPredicted RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 HERV-K104P61576 105 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 SSX2Q16385 188 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 MSMPQ1L6U9 139 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 C1orf185Q5T7R7 199 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 LPCAT3Q6P1A2 487 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 Q6ZR03 302 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 RTN4IP1Q8WWV3 396 aaPredicted RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 IL1F10Q8WWZ1 152 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 PRO1933Q9H354 126 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 TMPRSS5Q9H3S3 457 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 Q9N2K0 584 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 MMP26Q9NRE1 261 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 DUSP13Q9UII6 198 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 IGHV2OR16-5A0A0B4J2B6 119 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 RAC2P15153 192 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 HLA-GP17693 338 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 PSMB6P28072 239 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 GLP1RP43220 463 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 FAM27E3Q08E93 113 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 IL24Q13007 206 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 RAB32Q13637 225 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 SPIN3Q5JUX0 258 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 FAM180AQ6UWF9 173 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 RRNAD1Q96FB5 475 aaKnown RBP11.51□□□□□ -0.57
VMP1-201ENST00000262291 PIK3IP1Q96FE7 263 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 RNF126Q9BV68 326 aa11.51□□□□□ -0.57
VMP1-201ENST00000262291 CACNA1DQ01668 2161 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 SPTA1P02549 2419 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 IGKV1D-13A0A0B4J2D9 117 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 CRYM-AS1A6NIL9 109 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 OR5H1A6NKK0 313 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 RNASEK-C17orf49H0YIS7 233 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 TNFSF12O43508 249 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 SLC34A2O95436 690 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 SCGB1D2O95969 90 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 PPYP01298 95 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 IGKV1-13P0DP09 117 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 MEX3BQ6ZN04 569 aaKnown RBP11.5□□□□□ -0.57
VMP1-201ENST00000262291 BEND4Q6ZU67 534 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 SLC2A9Q9NRM0 540 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 TMEM100Q9NV29 134 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 MSGN1A6NI15 193 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 AP4M1O00189 453 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 NAPSAO96009 420 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 FAM87AP0C7U9 286 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 SRSF4Q08170 494 aaKnown RBP11.5□□□□□ -0.57
VMP1-201ENST00000262291 BAP18Q8IXM2 172 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 PLPPR1Q8TBJ4 325 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
VMP1-201ENST00000262291 EGLN1Q9GZT9 426 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 RELNP78509 3460 aa11.5□□□□□ -0.57
VMP1-201ENST00000262291 NBASA2RRP1 2371 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 M0R036 132 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 HSD17B6O14756 317 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 OR2H2O95918 312 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 MT-ND4LP03901 98 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 TPT1P13693 172 aaKnown RBP11.49□□□□□ -0.57
VMP1-201ENST00000262291 MPV17LQ2QL34 196 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
VMP1-201ENST00000262291 PDZD11Q5EBL8 140 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 FAM76BQ5HYJ3 339 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 SSX3Q99909 188 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 PARP12Q9H0J9 701 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms