RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 J3QR06 171 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 SMIM6P0DI80 62 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 P2RY1P47900 373 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 WNT2BQ93097 391 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 ANGPTL4Q9BY76 406 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 SS18L1O75177 396 aaPredicted RBP10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 PGA4P0DJD7 388 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 PGA5P0DJD9 388 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 IFITM3Q01628 133 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 NT5CQ8TCD5 201 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 IL36RNQ9UBH0 155 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 ARRDC5A6NEK1 342 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 TSPAN2O60636 221 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 CT62P0C5K7 136 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 PNRC1Q12796 327 aaPredicted RBP10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 SLC25A40Q8TBP6 338 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 DPH3P1Q9H4G8 78 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 PTPRZ1P23471 2315 aaPredicted RBP10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 IGHV3-35A0A0C4DH35 117 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 ANKRD20A5PA0PJZ0 165 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 CXorf1O96002 111 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 TMEM95Q3KNT9 176 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 TEPPQ6URK8 271 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 DDB2Q92466 427 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 SFRP2Q96HF1 295 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 OR4D9Q8NGE8 314 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 TMEM30AQ9NV96 361 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 C1RLQ9NZP8 487 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 FER1L4A9Z1Z3 1794 aa10.92□□□□□ -0.66
ARFGEF1-201ENST00000262215 PRF1P14222 555 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 SLC25A53Q5H9E4 307 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 WDR25Q64LD2 544 aaPredicted RBP10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 ADTRPQ96IZ2 230 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 ACVR1Q04771 509 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 OR10J6PQ8NGY7 276 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 RPP25Q9BUL9 199 aaKnown RBP10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 ZDHHC8Q9ULC8 765 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 TMEM238LA0A1B0GVL6 79 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 A6NJY4 79 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 CDC42EP2O14613 210 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 ATXN7O15265 892 aaPredicted RBP10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 FCGR2BP31994 310 aaPredicted RBP10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 CCL8P80075 99 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 ZNF385CQ66K41 422 aaPredicted RBP10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 PWWP2BQ6NUJ5 590 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 SLC52A3Q9NQ40 469 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 IGHV3OR16-10A0A075B7F0 116 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 A0A0B4J293 547 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 SLC25A1P53007 311 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 LY6EQ16553 131 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 KIAA1644Q3SXP7 199 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 C9orf50Q5SZB4 431 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 ADAMTS17Q8TE56 1095 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 PDE6DO43924 150 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 PPYP01298 95 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 DLX6P56179 175 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 ZNF506Q5JVG8 444 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 RNF133Q8WVZ7 376 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 RBFOX2O43251 390 aaKnown RBP eCLIP10.91□□□□□ -0.663e-6■■■■□ 22.4
ARFGEF1-201ENST00000262215 NDUFB4O95168 129 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 RBM11P57052 281 aaKnown RBP10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 PRICKLE4Q2TBC4 344 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 PET117Q6UWS5 81 aa10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 NUDT16L1Q9BRJ7 211 aaKnown RBP10.91□□□□□ -0.66
ARFGEF1-201ENST00000262215 TMEM50BP56557 158 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 UBE2V2Q15819 145 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 GPR35Q9HC97 309 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 RNF7Q9UBF6 113 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 NPIPB6E9PJ23 425 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 IGHV3-48P01763 117 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 MBNL2Q5VZF2 373 aaKnown RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 C10orf126Q8N4M7 172 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 OR11H7Q8NGC8 314 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 MARVELD1Q9BSK0 173 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 MRM2Q9UI43 246 aaKnown RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 ERVH48-1M5A8F1 160 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 SNAI2O43623 268 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 COL10A1Q03692 680 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 GHITMQ9H3K2 345 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 CLDN14O95500 239 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 CTSDP07339 412 aaPredicted RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 PCP4P48539 62 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 TRIP6Q15654 476 aaKnown RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 ZNF324BQ6AW86 544 aaPredicted RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 PRSS27Q9BQR3 290 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 ZNF665Q9H7R5 613 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 HEXA-AS1Q9H8Q6 139 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 FER1L6Q2WGJ9 1857 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 SYNGR1O43759 233 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 KLF9Q13886 244 aaPredicted RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 SPEM1Q8N4L4 309 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 GMPPAQ96IJ6 420 aaPredicted RBP10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 WDFY2Q96P53 400 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 FRRS1LQ9P0K9 344 aa10.9□□□□□ -0.66
ARFGEF1-201ENST00000262215 ZNF318Q5VUA4 2279 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms