RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 PCED1AQ9H1Q7 454 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 U3KQA8 63 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 ESPL1Q14674 2120 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 A0A1B0GU03 582 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 A0A1W2PR80 420 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 C5orf49A4QMS7 147 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 H0Y980 276 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 SRYQ05066 204 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 FOXO1Q12778 655 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 CLN3Q13286 438 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 HLA-BQ31612 363 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 LILRB2Q8N423 598 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 DNASE2BQ8WZ79 361 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 ABHD14BQ96IU4 210 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 PPP1R3CQ9UQK1 317 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 A0A087X0M5 115 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 KIR2DS1A0A191URI9 304 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 A0A1B0GX30 115 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 SMCO3A2RU48 225 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 CYB5R3P00387 301 aaPredicted RBP14.9□□□□□ -0.02
TRAM1-201ENST00000262213 CCL4P13236 92 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 KIR2DS4P43632 304 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 CLDN15P56746 228 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 KIR2DS1Q14954 304 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 H1FOOQ8IZA3 346 aaPredicted RBP14.9□□□□□ -0.02
TRAM1-201ENST00000262213 RCC1LQ96I51 464 aaKnown RBP14.9□□□□□ -0.02
TRAM1-201ENST00000262213 HIST1H2BLQ99880 126 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 PSENENQ9NZ42 101 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 ZNF391Q9UJN7 358 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 CLEC18AA5D8T8 446 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 PHOX2AO14813 284 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 TUSC2O75896 110 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 DDTP30046 118 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 FGF12P61328 243 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 ZFP36L1Q07352 338 aaKnown RBP14.9□□□□□ -0.02
TRAM1-201ENST00000262213 KRTAP27-1Q3LI81 207 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 MRPL21Q7Z2W9 205 aaKnown RBP14.9□□□□□ -0.02
TRAM1-201ENST00000262213 CLEC18CQ8NCF0 446 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 CISD1Q9NZ45 108 aaKnown RBP14.9□□□□□ -0.02
TRAM1-201ENST00000262213 OR1A1Q9P1Q5 309 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 RBM7Q9Y580 266 aaKnown RBP14.9□□□□□ -0.02
TRAM1-201ENST00000262213 ATP23Q9Y6H3 246 aa14.9□□□□□ -0.02
TRAM1-201ENST00000262213 P04436 131 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 MKXQ8IYA7 352 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 OR13D1Q8NGV5 346 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 OR10J5Q8NHC4 309 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 CA5BP1Q8WTZ4 195 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 PRO3102Q9H379 93 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 SDF2L1Q9HCN8 221 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 ARGFXA6NJG6 315 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 B4DEV8 164 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 SPANXN5Q5MJ07 72 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 OR2V1Q8NHB1 315 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 RBKSQ9H477 322 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 TCFL5Q9UL49 500 aa14.89□□□□□ -0.03
TRAM1-201ENST00000262213 LOC102723996A0A087X1L8 192 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 DUXBA0A1W2PPF3 345 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 CD300LBA8K4G0 201 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 MMP7P09237 267 aaPredicted RBP14.88□□□□□ -0.03
TRAM1-201ENST00000262213 EPHA8P29322 1005 aaPredicted RBP14.88□□□□□ -0.03
TRAM1-201ENST00000262213 S100GP29377 79 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 IL2RGP31785 369 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 FOXG1P55316 489 aaPredicted RBP14.88□□□□□ -0.03
TRAM1-201ENST00000262213 ARF1P84077 181 aaKnown RBP14.88□□□□□ -0.03
TRAM1-201ENST00000262213 DPPA3Q6W0C5 159 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 CLDN23Q96B33 292 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 RPUSD4Q96CM3 377 aaKnown RBP14.88□□□□□ -0.03
TRAM1-201ENST00000262213 ZNF552Q9H707 407 aaPredicted RBP14.88□□□□□ -0.03
TRAM1-201ENST00000262213 KCNS2Q9ULS6 477 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 TSTD3H0UI37 97 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 KLF7O75840 302 aaPredicted RBP14.88□□□□□ -0.03
TRAM1-201ENST00000262213 NGFP01138 241 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 ERVS71-1P61550 626 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 TESK1Q15569 626 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 OR8G2PQ6IF36 304 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 PCSK4Q6UW60 755 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 ZDHHC23Q8IYP9 409 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 M1APQ8TC57 530 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 PSMF1Q92530 271 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 SGCZQ96LD1 299 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 C1QTNF5Q9BXJ0 243 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 OR14J1Q9UGF5 321 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 DOCK11Q5JSL3 2073 aa14.88□□□□□ -0.03
TRAM1-201ENST00000262213 MAP1LC3B2A6NCE7 125 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 SYNGR2O43760 224 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 MLF1P58340 268 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 HAPLN4Q86UW8 402 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 OR4X1Q8NH49 305 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 MRPL30Q8TCC3 161 aaKnown RBP14.87□□□□□ -0.03
TRAM1-201ENST00000262213 SMIM7Q9BQ49 75 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 MAP1LC3BQ9GZQ8 125 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 LAMP3Q9UQV4 416 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 UBE2L5PA0A1B0GUS4 154 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 C9J4A7 227 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 MDH2P40926 338 aaKnown RBP14.87□□□□□ -0.03
TRAM1-201ENST00000262213 PKIAP61925 76 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 RPS16P62249 146 aaKnown RBP14.87□□□□□ -0.03
TRAM1-201ENST00000262213 OR8G1Q15617 311 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 C16orf82Q7Z2V1 217 aa14.87□□□□□ -0.03
TRAM1-201ENST00000262213 ZNF525Q8N782 197 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms