RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 S100A10P60903 97 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 BHLHE23Q8NDY6 225 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR1K1Q8NGR3 316 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 FGFBP3Q8TAT2 258 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 PARP12Q9H0J9 701 aaKnown RBP16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 SLC5A6Q9Y289 635 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 CHTOPQ9Y3Y2 248 aaKnown RBP16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 NBASA2RRP1 2371 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 COA6Q5JTJ3 125 aaKnown RBP16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 SYT3Q9BQG1 590 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 SFXN3Q9BWM7 321 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 PLEK2Q9NYT0 353 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 SRSF10O75494 262 aaKnown RBP16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 PNPP00491 289 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 PRH1P02810 166 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 CTSSP25774 331 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 TMEM33P57088 247 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 PCBD1P61457 104 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 MFGE8Q08431 387 aaPredicted RBP16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 FDX2Q6P4F2 183 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 SLC35E3Q7Z769 313 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 HOGA1Q86XE5 327 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR52N4Q8NGI2 321 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR1P1Q8NH06 330 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 PTX4Q96A99 478 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 URM1Q9BTM9 101 aaKnown RBP16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 KCNK15Q9H427 330 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 TMEM242Q9NWH2 141 aa16.21■□□□□ 0.19
COL4A3BP-201ENST00000261415 MMP7P09237 267 aaPredicted RBP16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 PGA5P0DJD9 388 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 SEMA6DQ8NFY4 1073 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 SCGB3A2Q96PL1 93 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 R4GMQ9 66 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 KIR2DL5BA0A0G2JN68 375 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 KIR2DL5BA0A0G2JPC4 375 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 A8MXE2 369 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 COX5AP20674 150 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 HSD11B1P28845 292 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 KIR2DL5AQ8N109 375 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 OR13C9Q8NGT0 318 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 AQP3Q92482 292 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 C4orf45Q96LM5 186 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 NIPSNAP3BQ9BS92 247 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 OR2H1Q9GZK4 316 aa16.2■□□□□ 0.18
COL4A3BP-201ENST00000261415 A0A0G2JNJ9 132 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 HSD17B6O14756 317 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 SIAH2O43255 324 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 LYZL6O75951 148 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 CCKARP32238 428 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 GRB2P62993 217 aaKnown RBP16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 PSG4Q00888 419 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 TGFBR3Q03167 851 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 C4orf17Q53FE4 359 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 WDR38Q5JTN6 314 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 CLEC18BQ6UXF7 455 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 SLC25A26Q70HW3 274 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 TRAPPC6BQ86SZ2 158 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 ZNF429Q86V71 674 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 TSEN15Q8WW01 171 aaKnown RBP16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 BCL2L2Q92843 193 aaPredicted RBP16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 OR10C1Q96KK4 312 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 GINS3Q9BRX5 216 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 LPAR2Q9HBW0 351 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 Q9UFV3 132 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 ZNF503-AS2A6NEH8 195 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 A6NNC1 897 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 HLA-HP01893 362 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 HRH1P35367 487 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 NCR3LG1Q68D85 454 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 CATSPERDQ86XM0 798 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 OR51A2Q8NGJ7 313 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 MARCH1Q8TCQ1 289 aa16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 SMG1Q96Q15 3661 aaKnown RBP16.19■□□□□ 0.18
COL4A3BP-201ENST00000261415 TRGV8A0A0C4DH27 118 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 RBFOX3A6NFN3 312 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 SYNGR3O43761 229 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 RAD51DO75771 328 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 HNF1AP20823 631 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 MMP16P51512 607 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 RND2P52198 227 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 TMEM104Q8NE00 496 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 GSX1Q9H4S2 264 aaPredicted RBP16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 FAM206AQ9NX38 181 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 GSKIPQ9P0R6 139 aa16.18■□□□□ 0.18
COL4A3BP-201ENST00000261415 TRBV24-1A0A075B6N3 115 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 PPP5D1E7EU14 171 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 E9PLN8 166 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 TCF21O43680 179 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 CHRM2P08172 466 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 OPRM1P35372 400 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 OR8G5Q8NG78 346 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 TMEM18Q96B42 140 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 VKORC1Q9BQB6 163 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 ZMAT3Q9HA38 289 aaKnown RBP16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 CDH20Q9HBT6 801 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 G6PC2Q9NQR9 355 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 GPR173Q9NS66 373 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 SLC22A13Q9Y226 551 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 CA7P43166 264 aa16.17■□□□□ 0.18
COL4A3BP-201ENST00000261415 BTNL3Q6UXE8 466 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms