RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 BET1O15155 118 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 PHF1O43189 567 aaPredicted RBP14.89□□□□□ -0.03
SSB-201ENST00000260956 SCO1O75880 301 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 GAPDHP04406 335 aaKnown RBP14.89□□□□□ -0.03
SSB-201ENST00000260956 TUBG1P23258 451 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 UCP1P25874 307 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 MDH2P40926 338 aaKnown RBP14.89□□□□□ -0.03
SSB-201ENST00000260956 P2RY6Q15077 328 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 MST1LQ2TV78 715 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 FAM209AQ5JX71 171 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 MOB1BQ7L9L4 216 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 DMBX1Q8NFW5 382 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 OR8G5Q8NG78 346 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 OR5T2Q8NGG2 359 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 NEK7Q8TDX7 302 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 ARV1Q9H2C2 271 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 TUBG2Q9NRH3 451 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 MBNL3Q9NUK0 354 aaKnown RBP14.89□□□□□ -0.03
SSB-201ENST00000260956 SLC25A15Q9Y619 301 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 OR5H1A6NKK0 313 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.88□□□□□ -0.03
SSB-201ENST00000260956 HS3ST1O14792 307 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 TAAR5O14804 337 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 DEGS1O15121 323 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 RPL12P30050 165 aaKnown RBP14.88□□□□□ -0.03
SSB-201ENST00000260956 CEACAM8P31997 349 aaPredicted RBP14.88□□□□□ -0.03
SSB-201ENST00000260956 SRPXP78539 464 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 TUSC1Q2TAM9 212 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 OR52M1Q8NGK5 317 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 PLA2G2EQ9NZK7 142 aa14.88□□□□□ -0.03
SSB-201ENST00000260956 RCL1Q9Y2P8 373 aaKnown RBP14.88□□□□□ -0.03
SSB-201ENST00000260956 A1L4Q6 167 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 LGALS8O00214 317 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 CDIPTO14735 213 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 CDS2O95674 445 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 HOXD4P09016 255 aaPredicted RBP14.87□□□□□ -0.03
SSB-201ENST00000260956 NUP62P37198 522 aaPredicted RBP14.87□□□□□ -0.03
SSB-201ENST00000260956 HMGN3Q15651 99 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 NMSQ5H8A3 153 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 SPIN3Q5JUX0 258 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 MBNL2Q5VZF2 373 aaKnown RBP14.87□□□□□ -0.03
SSB-201ENST00000260956 RPL7L1Q6DKI1 246 aaKnown RBP14.87□□□□□ -0.03
SSB-201ENST00000260956 SELENOHQ8IZQ5 122 aaKnown RBP14.87□□□□□ -0.03
SSB-201ENST00000260956 OR1S2Q8NGQ3 325 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 SECTM1Q8WVN6 248 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 TMED6Q8WW62 240 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 RND1Q92730 232 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 BSCL2Q96G97 398 aaPredicted RBP14.87□□□□□ -0.03
SSB-201ENST00000260956 PLEKHA2Q9HB19 425 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 CCL28Q9NRJ3 127 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 FBXL17Q9UF56 701 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 PROCRQ9UNN8 238 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 WIPI2Q9Y4P8 454 aa14.87□□□□□ -0.03
SSB-201ENST00000260956 IGLV2-14P01704 120 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 ZNF44P15621 663 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 TIMP3P35625 211 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 OR8G1Q15617 311 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 MSMPQ1L6U9 139 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 BHLHA15Q7RTS1 189 aaPredicted RBP14.86□□□□□ -0.03
SSB-201ENST00000260956 STPG2Q8N412 459 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 OR2W1Q9Y3N9 320 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 CHD3Q12873 2000 aaKnown RBP14.86□□□□□ -0.03
SSB-201ENST00000260956 TACC2O95359 2948 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 A0A1B0GW55 424 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUXBA0A1W2PPF3 345 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 E5RGE8 158 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 H0Y980 276 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUX4L2P0CJ85 424 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUX4L3P0CJ86 424 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUX4L4P0CJ87 422 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUX4L5P0CJ88 424 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUX4L6P0CJ89 424 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUX4L7P0CJ90 424 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 M6PRP20645 277 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 LMO1P25800 156 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 TESK1Q15569 626 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 C1QTNF12Q5T7M4 302 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 ERGIC1Q969X5 290 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 DUX4Q9UBX2 424 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 FBXO9Q9UK97 447 aaPredicted RBP14.86□□□□□ -0.03
SSB-201ENST00000260956 NSG2Q9Y328 171 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 LSM5Q9Y4Y9 91 aaKnown RBP14.86□□□□□ -0.03
SSB-201ENST00000260956 POMT1Q9Y6A1 747 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 SESN1Q9Y6P5 492 aa14.86□□□□□ -0.03
SSB-201ENST00000260956 NKX2-6A6NCS4 301 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 SIRPB1O00241 398 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 HOXC12P31275 282 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 HIST2H2BCQ6DN03 193 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 ZNF474Q6S9Z5 364 aaPredicted RBP14.85□□□□□ -0.03
SSB-201ENST00000260956 FOXRED2Q8IWF2 684 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 ZNF808Q8N4W9 903 aaPredicted RBP14.85□□□□□ -0.03
SSB-201ENST00000260956 IL22RA2Q969J5 263 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 KIRREL1Q96J84 757 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 GPHA2Q96T91 129 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 BCL2L14Q9BZR8 327 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 OR1A1Q9P1Q5 309 aa14.85□□□□□ -0.03
SSB-201ENST00000260956 GRNP28799 593 aaKnown RBP14.84□□□□□ -0.03
SSB-201ENST00000260956 TMEM33P57088 247 aa14.84□□□□□ -0.03
SSB-201ENST00000260956 ZNF565Q8N9K5 539 aa14.84□□□□□ -0.03
SSB-201ENST00000260956 OR5D13Q8NGL4 314 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms