RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SLC25A6P12236 298 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 TAS2R30P59541 319 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 OR2B8PP59922 312 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 HLA-DRB3P79483 266 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 LPAL2Q16609 132 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 TCEAL6Q6IPX3 200 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 C1orf210Q8IVY1 113 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 OR51H1Q8NH63 302 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 YPEL4Q96NS1 127 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 HIPK2Q9H2X6 1198 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 KNTC1P50748 2209 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 PRSS47A8MTI9 375 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 H3BQ15 152 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
DDX56-201ENST00000258772 SERPINE2P07093 398 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 SMIM6P0DI80 62 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 PSG2P11465 335 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 TLE4Q04727 773 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 ICAM4Q14773 271 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 STX12Q86Y82 276 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 NANPQ8TBE9 248 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 CABLES2Q9BTV7 478 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 DDA1Q9BW61 102 aa12.96□□□□□ -0.33
DDX56-201ENST00000258772 RHBDL1O75783 438 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 S100A9P06702 114 aaKnown RBP12.96□□□□□ -0.34
DDX56-201ENST00000258772 APLNRP35414 380 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 RPL23AP62750 156 aaKnown RBP12.96□□□□□ -0.34
DDX56-201ENST00000258772 ZNF506Q5JVG8 444 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 SLC16A13Q7RTY0 426 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 ZNF295-AS1Q8N0V1 137 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 TCEAL3Q969E4 200 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 OR51B6Q9H340 312 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 SEBOXQ9HB31 216 aaPredicted RBP12.96□□□□□ -0.34
DDX56-201ENST00000258772 ABI3Q9P2A4 366 aa12.96□□□□□ -0.34
DDX56-201ENST00000258772 PIGBOS1A0A0B4J2F0 54 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 ARGFXA6NJG6 315 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 H3BP45 60 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 TXNL1O43396 289 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 DFFBO76075 338 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 HSPB1P04792 205 aaKnown RBP12.95□□□□□ -0.34
DDX56-201ENST00000258772 CA6P23280 308 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 CEBPGP53567 150 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 C3AR1Q16581 482 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 IZUMO4Q1ZYL8 232 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 OR2T2Q6IF00 324 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 DPPA3Q6W0C5 159 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 HEPN1Q6WQI6 88 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 DBX2Q6ZNG2 339 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 Q6ZRM9 215 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 LINC00696Q6ZRV3 163 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 C1QL4Q86Z23 238 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 MCEMP1Q8IX19 187 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 OR10V1Q8NGI7 309 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 IL1F10Q8WWZ1 152 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 RAB39BQ96DA2 213 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 RBMXL1Q96E39 390 aaKnown RBP12.95□□□□□ -0.34
DDX56-201ENST00000258772 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 PKIBQ9C010 78 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 OR51I2Q9H344 312 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 FOXJ2Q9P0K8 574 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 DEGS1O15121 323 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 FBP1P09467 338 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 WNT2P09544 360 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 ZNF806P0C7X5 589 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 IGFBP7Q16270 282 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 THNSL2Q86YJ6 484 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 CLDND2Q8NHS1 167 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 MUCL1Q96DR8 90 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 OR1A1Q9P1Q5 309 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 PRSS50Q9UI38 385 aa12.95□□□□□ -0.34
DDX56-201ENST00000258772 IGLV2-14P01704 120 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 HBE1P02100 147 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 OR8U8P0C7N1 319 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 NQO2P16083 231 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 RAB2AP61019 212 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 CLN3Q13286 438 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 DCAF10Q5QP82 559 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 Q6P435 159 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 ZNF429Q86V71 674 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 LILRB2Q8N423 598 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 CYB561D1Q8N8Q1 229 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 WSB1Q9Y6I7 421 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 ZNF727A8MUV8 499 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 NPIPB11E5RHQ5 1161 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 H0YL77 283 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.94□□□□□ -0.34
DDX56-201ENST00000258772 AP4M1O00189 453 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 IFNA5P01569 189 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 IFNA17P01571 189 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 IGKV1-39P01597 117 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 IGKV1D-39P04432 117 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 TAGLN2P37802 199 aaKnown RBP12.94□□□□□ -0.34
DDX56-201ENST00000258772 UBE2KP61086 200 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 TMEM267Q0VDI3 215 aaPredicted RBP12.94□□□□□ -0.34
DDX56-201ENST00000258772 RNASE11Q8TAA1 199 aaKnown RBP12.94□□□□□ -0.34
DDX56-201ENST00000258772 LSM10Q969L4 123 aaKnown RBP12.94□□□□□ -0.34
DDX56-201ENST00000258772 GPR87Q9BY21 358 aa12.94□□□□□ -0.34
DDX56-201ENST00000258772 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 CNOT4O95628 575 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms