RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 WDR54Q9H977 334 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 GP6Q9HCN6 339 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC7A10Q9NS82 523 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 IGSF23A1L1A6 192 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SAP30O75446 220 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 PPICP45877 212 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 RPL34P49207 117 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 PPP2CAP67775 309 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 GUCA2AQ02747 115 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 FUT7Q11130 342 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 GAGE2AQ6NT46 116 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 MORN3Q6PF18 240 aaPredicted RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 APCDD1LQ8NCL9 501 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 LRRC29Q8WV35 223 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 KCNS1Q96KK3 526 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 TMEM147Q9BVK8 224 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 ISG20L2Q9H9L3 353 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 GPR27Q9NS67 375 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 FITM1A5D6W6 292 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 IGLON5A6NGN9 336 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 ATXN7O15265 892 aaPredicted RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 GPR6P46095 362 aaPredicted RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 RTL8BQ17RB0 113 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 C12orf73Q69YU5 71 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 ANKRD33Q7Z3H0 272 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 ANKRD37Q7Z713 158 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 VSTM2LQ96N03 204 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SRSF8Q9BRL6 282 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 ANTXRLA6NF34 631 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 KLF7O75840 302 aaPredicted RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 KIR2DL1P43626 348 aaPredicted RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SEC61GP60059 68 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 OR2A1Q8NGT9 310 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 ZNF563Q8TA94 476 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SMIM19Q96E16 107 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 GGTLC1Q9BX51 225 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 C1QTNF4Q9BXJ3 329 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 ONECUT1Q9UBC0 465 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 B4GALT6Q9UBX8 382 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 YBX2Q9Y2T7 364 aaKnown RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 ADAM20O43506 726 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SPINK4O60575 86 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SRFP11831 508 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 ALOX5APP20292 161 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 ACRV1P26436 265 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 UBE2L3P68036 154 aaKnown RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 C8orf82Q6P1X6 216 aaPredicted RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 DTWD2Q8NBA8 298 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 OR1L4Q8NGR5 311 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 CALHM2Q9HA72 323 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 CISD1Q9NZ45 108 aaKnown RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 ST6GALNAC2Q9UJ37 374 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 NPIPB5A8MRT5 1133 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 NCBP2P52298 156 aaKnown RBP eCLIP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 CATR1Q13166 79 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 HLA-DQA1Q5Y7H0 255 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 MFSD12Q6NUT3 480 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SYS1Q8N2H4 156 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 OR2H1Q9GZK4 316 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 ZMAT3Q9HA38 289 aaKnown RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 HILPDAQ9Y5L2 63 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 FAM231BA6NCW3 169 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SERF1AO75920 110 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 PPP1R3DO95685 299 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 MT-CO3P00414 261 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 RPL7P18124 248 aaKnown RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SRSF2Q01130 221 aaKnown RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 PSMG4Q5JS54 123 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 FAM27D1Q5T7N8 215 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SHISA6Q6ZSJ9 500 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 PRSS3P2Q8NHM4 247 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 GPR82Q96P67 336 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 OR10A2Q9H208 303 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 FTSJ1Q9UET6 329 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 PSG8Q9UQ74 426 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 KLF12Q9Y4X4 402 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 MUC21A0A0G2JKD1 596 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 MUC21A0A140T8X8 626 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SSSCA1O60232 199 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 HYPMO75409 117 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC2A10O95528 541 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 CXorf1O96002 111 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 DEFB103AP81534 67 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 KLRB1Q12918 225 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 MUC21Q5SSG8 566 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 DUSP15Q9H1R2 295 aaPredicted RBP5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 VDAC3Q9Y277 283 aa5.92□□□□□ -1.46
PDGFRA-201ENST00000257290 TRAV8-7A0A075B6U6 113 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 TRAV8-4A0A0B4J246 113 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 F8W1H4 67 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 RER1O15258 196 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 SRP19P09132 144 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 MST1P26927 711 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 ZNF83P51522 516 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 WDR5BQ86VZ2 330 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 OR51H1Q8NH63 302 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 SSBP3Q9BWW4 388 aaPredicted RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 CXCL16Q9H2A7 254 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 ARFGEF1Q9Y6D6 1849 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 MPDU1O75352 247 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms