RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 JKAMPQ9P055 326 aa9.65□□□□□ -0.86
CLUHP3-201ENST00000254109 TMEM56-RWDD3S4R434 201 aa9.65□□□□□ -0.86
CLUHP3-201ENST00000254109 NKX2-6A6NCS4 301 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 SIRPB1O00241 398 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 CDIPTO14735 213 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 GPR137BO60478 399 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 GAPDHP04406 335 aaKnown RBP9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 PGA5P0DJD9 388 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 CHRNB4P30926 498 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 TMEM33P57088 247 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 ERVK11-1P61568 191 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 GNMTQ14749 295 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 P2RY6Q15077 328 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 C4orf17Q53FE4 359 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 SHEQ5VZ18 495 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 RPL7L1Q6DKI1 246 aaKnown RBP9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 C20orf204Q6ZNR8 217 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 STPG2Q8N412 459 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 LHFPL5Q8TAF8 219 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 ARL11Q969Q4 196 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 CCL28Q9NRJ3 127 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 ERRFI1Q9UJM3 462 aaPredicted RBP9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 OR2W1Q9Y3N9 320 aa9.64□□□□□ -0.87
CLUHP3-201ENST00000254109 IGKV1D-13A0A0B4J2D9 117 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 IGKV1-6A0A0C4DH72 117 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 DUXBA0A1W2PPF3 345 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 OR2H2O95918 312 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 ACAA1P09110 424 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 IGKV1-13P0DP09 117 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 P2RY1P47900 373 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 ZNF154Q13106 437 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 ZNF146Q15072 292 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 BHLHA15Q7RTS1 189 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 C5orf24Q7Z6I8 188 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 C1orf174Q8IYL3 243 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 OR8G5Q8NG78 346 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 OR52M1Q8NGK5 317 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 SAT2Q96F10 170 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 NARS2Q96I59 477 aaKnown RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 BCL2L14Q9BZR8 327 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 CXXC4Q9H2H0 198 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 COQ3Q9NZJ6 369 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 LPAR3Q9UBY5 353 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 FBXL17Q9UF56 701 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 PURGQ9UJV8 347 aaKnown RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 TRAPPC2LQ9UL33 140 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 POMT1Q9Y6A1 747 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 BORCS7-ASMTA0A0B4J1R7 106 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 SLC33A1O00400 549 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 TIMM8AO60220 97 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 ZG16O60844 167 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 RCC1P18754 421 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 PVALBP20472 110 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 GCH1P30793 250 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 MPV17P39210 176 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 ALKBH6Q3KRA9 238 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 ZNF718Q3SXZ3 478 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 FAM209AQ5JX71 171 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 C22orf34Q6ZV56 151 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 H1FOOQ8IZA3 346 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 SELENOHQ8IZQ5 122 aaKnown RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 OR4D5Q8NGN0 318 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 IL1F10Q8WWZ1 152 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 S100PBPQ96BU1 408 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 CABLES2Q9BTV7 478 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 RCL1Q9Y2P8 373 aaKnown RBP9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 AMDHD2Q9Y303 409 aa9.63□□□□□ -0.87
CLUHP3-201ENST00000254109 H0Y980 276 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 H0YL77 283 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 CECR9P0C854 216 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 FAM157CP0CG43 387 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 UCP1P25874 307 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 CCKARP32238 428 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 C1QTNF12Q5T7M4 302 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 FAM208BQ5VWN6 2430 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 ALKBH2Q6NS38 261 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 ZNF497Q6ZNH5 498 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 BOLLQ8N9W6 283 aaKnown RBP9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 BPIFCQ8NFQ6 507 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 OR5D13Q8NGL4 314 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 CA5BP1Q8WTZ4 195 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 ABHD14BQ96IU4 210 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 ZNF462Q96JM2 2506 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 SMIM3Q9BZL3 60 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 MMP26Q9NRE1 261 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 TAAR3PQ9P1P4 343 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 SPEF1Q9Y4P9 236 aa9.62□□□□□ -0.87
CLUHP3-201ENST00000254109 CHD6Q8TD26 2715 aa9.61□□□□□ -0.87
CLUHP3-201ENST00000254109 OR5H1A6NKK0 313 aa9.61□□□□□ -0.87
CLUHP3-201ENST00000254109 NPIPB11E5RHQ5 1161 aa9.61□□□□□ -0.87
CLUHP3-201ENST00000254109 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
CLUHP3-201ENST00000254109 HSPA12AO43301 675 aa9.61□□□□□ -0.87
CLUHP3-201ENST00000254109 PGLYRP1O75594 196 aaPredicted RBP9.61□□□□□ -0.87
CLUHP3-201ENST00000254109 IGLV1-44P01699 117 aa9.61□□□□□ -0.87
CLUHP3-201ENST00000254109 APOC3P02656 99 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms