RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TSPAN13O95857 204 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 LINC00614P0C842 121 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 DANCRP0C864 163 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 LDLRAD2Q5SZI1 272 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 SLC37A2Q8TED4 501 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 IL36GQ9NZH8 169 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 KIAA1217Q5T5P2 1943 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 A0A096LPE4 126 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 A0A1W2PPZ6 126 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 H0YIG0 161 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 TMIGD3P0DMS9 266 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 PPP1CCP36873 323 aaKnown RBP11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 Q5BKY6 102 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 SPINK9Q5DT21 86 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 IBA57Q5T440 356 aaKnown RBP11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 HOGA1Q86XE5 327 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 ATOH7Q8N100 152 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 PATE1Q8WXA2 126 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 SPCS1Q9Y6A9 102 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 A0A1W2PPC4 97 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 FFAR1O14842 300 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 LCN2P80188 198 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 FAM219AQ8IW50 185 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 TSPAN32Q96QS1 320 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 PKIBQ9C010 78 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 CISD1Q9NZ45 108 aaKnown RBP11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 OOEPA6NGQ2 149 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 KLRC4-KLRK1H3BQV0 150 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 CD1AP06126 327 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 FGF5P12034 268 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 MPLP40238 635 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 TMEM50BP56557 158 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 TCTN1Q2MV58 587 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 MISP3Q96FF7 219 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 ABHD14BQ96IU4 210 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 MEGF9Q9H1U4 602 aa11.56□□□□□ -0.56
PCDHGA3-201ENST00000253812 KCNE1BA0A087WTH5 132 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 CA6P23280 308 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 RRADP55042 308 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 ISXQ2M1V0 245 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 FBLN7Q53RD9 439 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 YRDCQ86U90 279 aaKnown RBP11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR2V1Q8NHB1 315 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 UBE2CO00762 179 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 CXCL13O43927 109 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 GNG7O60262 68 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 SFTPCP11686 197 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 TMEM196Q5HYL7 178 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 ST6GALNAC3Q8NDV1 305 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 ZNF519Q8TB69 540 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 MRGPRX1Q96LB2 322 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 FOXB1Q99853 325 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 DNAJB12Q9NXW2 375 aaKnown RBP11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 KCNMB2Q9Y691 235 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 SHROOM3Q8TF72 1996 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 IGHV3-20A0A0C4DH32 117 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 CRXO43186 299 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 CTSVO60911 334 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 VSIG8P0DPA2 414 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 CTLA4P16410 223 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 OTX1P32242 354 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 PMELP40967 661 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 FOXF1Q12946 379 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 CEACAM16Q2WEN9 425 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 TEPPQ6URK8 271 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 MVB12AQ96EY5 273 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 TINAGQ9UJW2 476 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 GRIFINA4D1Z8 144 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 GCM2O75603 506 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 KBTBD11O94819 623 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 HKR1P10072 659 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 EFNB2P52799 333 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 PPP2CBP62714 309 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 KLRB1Q12918 225 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 TGIF1Q15583 401 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 LAMTOR1Q6IAA8 161 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 RFESDQ8TAC1 157 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 RPEQ96AT9 228 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 C14orf144Q96I85 54 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 LINC00615Q96LM1 132 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 ASCL3Q9NQ33 180 aa11.55□□□□□ -0.56
PCDHGA3-201ENST00000253812 CD27P26842 260 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 FAM219BQ5XKK7 198 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 TMEM211Q6ICI0 200 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR10AG1Q8NH19 301 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 FBLIM1Q8WUP2 373 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 KCNE4Q8WWG9 221 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 ASB5Q8WWX0 329 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 H7C2G1 150 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 DLEU1O43261 78 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 AMY1AP04745 511 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 MYBPHQ13203 477 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 FAM53BQ14153 422 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 CD200R1LQ6Q8B3 271 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 FAM181AQ8N9Y4 354 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR10AC1Q8NH08 325 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR4C3Q8NH37 302 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 CCL4L1Q8NHW4 92 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms