RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ZNF32P17041 273 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 MSR1P21757 451 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 EPHA8P29322 1005 aaPredicted RBP10.03□□□□□ -0.8
SOX9-201ENST00000245479 UNC119Q13432 240 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 PLCE1Q9P212 2302 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 DCHS1Q96JQ0 3298 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 C5orf49A4QMS7 147 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 RFPL3SP0C7P2 107 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 CNEP1R1Q8N9A8 125 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 UHRF2Q96PU4 802 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 ENY2Q9NPA8 101 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 FZR1Q9UM11 496 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 A0A0J9YW62 118 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 KIR2DS1A0A191URI9 304 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 DHHO43323 396 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 MRPL33O75394 65 aaKnown RBP10.02□□□□□ -0.8
SOX9-201ENST00000245479 PMCHP20382 165 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 KIR2DS4P43632 304 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 PLP2Q04941 152 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 KIR2DS1Q14954 304 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 ABHD17BQ5VST6 288 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 C16orf82Q7Z2V1 217 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 C11orf42Q8N5U0 333 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 TMEM252Q8N6L7 170 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 NOXO1Q8NFA2 376 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 OR11L1Q8NGX0 322 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 VN1R17PQ8TDU5 208 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 TMEM68Q96MH6 324 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 CDX2Q99626 313 aaPredicted RBP10.02□□□□□ -0.8
SOX9-201ENST00000245479 PCGF1Q9BSM1 259 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 ACTR3CQ9C0K3 210 aaPredicted RBP10.02□□□□□ -0.8
SOX9-201ENST00000245479 AURKAIP1Q9NWT8 199 aaPredicted RBP10.02□□□□□ -0.8
SOX9-201ENST00000245479 VAX2Q9UIW0 290 aa10.02□□□□□ -0.8
SOX9-201ENST00000245479 MGST1P10620 155 aaKnown RBP10.02□□□□□ -0.81
SOX9-201ENST00000245479 THBS4P35443 961 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 SNAI3Q3KNW1 292 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 PHYHD1Q5SRE7 291 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 OSR2Q8N2R0 312 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 RNF133Q8WVZ7 376 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 ST8SIA1Q92185 356 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
SOX9-201ENST00000245479 DUSP23Q9BVJ7 150 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 TMEM9BQ9NQ34 198 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 KCNIP1Q9NZI2 227 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 SHISA7A6NL88 538 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 DBX1A6NMT0 343 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 F6UZH7 168 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 SOD3P08294 240 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 HIKESHIQ53FT3 197 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 SLC23A3Q6PIS1 610 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 G6PC2Q9NQR9 355 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 NCOR2Q9Y618 2525 aa10.02□□□□□ -0.81
SOX9-201ENST00000245479 NRASP01111 189 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 IL24Q13007 206 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 OR52M1Q8NGK5 317 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 FAM234AQ9H0X4 552 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 PPP1R3CQ9UQK1 317 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 LOC390937A0A1W2PQ73 354 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 CLEC18AA5D8T8 446 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 MT-CO2P00403 227 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 BCL2P10415 239 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 CSRP2Q16527 193 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 MST1LQ2TV78 715 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 PLPPR5Q32ZL2 321 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 ASPHD2Q6ICH7 369 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 VHLLQ6RSH7 139 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 Q6ZN92 141 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 HIST3H2BBQ8N257 126 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 CLEC18CQ8NCF0 446 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 OR10J5Q8NHC4 309 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 ZNF519Q8TB69 540 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 SEBOXQ9HB31 216 aaPredicted RBP10.01□□□□□ -0.81
SOX9-201ENST00000245479 TRAPPC2LQ9UL33 140 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 MAP1AP78559 2803 aaPredicted RBP10.01□□□□□ -0.81
SOX9-201ENST00000245479 DUXBA0A1W2PPF3 345 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 E9PLN8 166 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 CXCL1P09341 107 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 COX5AP20674 150 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 FUT3P21217 361 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 CNN1P51911 297 aaKnown RBP10.01□□□□□ -0.81
SOX9-201ENST00000245479 HERPUD1Q15011 391 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 COL5A1-AS1Q5SY13 56 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 FDX2Q6P4F2 183 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 MAML2Q8IZL2 1156 aaPredicted RBP10.01□□□□□ -0.81
SOX9-201ENST00000245479 KLHDC1Q8N7A1 406 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 MUCL1Q96DR8 90 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 OXGR1Q96P68 337 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 ATP5SQ99766 215 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 NAGKQ9UJ70 344 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 IGKV3D-11A0A0A0MRZ8 115 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 LOC102725191A0A1B0GVB3 256 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 DHRS7CA6NNS2 312 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 SPINK4O60575 86 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 CDS2O95674 445 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 IGLV3-21P80748 117 aaPredicted RBP10.01□□□□□ -0.81
SOX9-201ENST00000245479 ELOBQ15370 118 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms