RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 A0A1B0GU03 582 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 NCBP2LA6PVI3 153 aaKnown RBP17.3■□□□□ 0.36
SOX4-201ENST00000244745 TSPAN2O60636 221 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 PPOXP50336 477 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 UNQ9370/PRO34162Q6UXP9 181 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 SMDT1Q9H4I9 107 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 SEMA7AO75326 666 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 SLC23A3Q6PIS1 610 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 SLC35E3Q7Z769 313 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 IGLV1-36A0A0B4J1U3 117 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 TRGV8A0A0C4DH27 118 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 GAPDHP04406 335 aaKnown RBP17.3■□□□□ 0.36
SOX4-201ENST00000244745 ZNF488Q96MN9 340 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 TMEM191AQ9H0A3 160 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 SHISA3A0PJX4 238 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 SNURFLB1AK76 121 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 RUNX1Q01196 453 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 MRPL54Q6P161 138 aaKnown RBP17.3■□□□□ 0.36
SOX4-201ENST00000244745 OR1P1Q8NH06 330 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 GGACTQ9BVM4 153 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 TREM2Q9NZC2 230 aa17.3■□□□□ 0.36
SOX4-201ENST00000244745 DIRC3C9JPN6 131 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 NEURL1O76050 574 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 CTSBP07858 339 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 KLF3P57682 345 aaPredicted RBP17.29■□□□□ 0.36
SOX4-201ENST00000244745 RPL24P83731 157 aaKnown RBP17.29■□□□□ 0.36
SOX4-201ENST00000244745 ANKRD55Q3KP44 614 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 Q56UQ5 140 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 SLC36A1Q7Z2H8 476 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 OR4P4Q8NGL7 312 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 ADAMTS17Q8TE56 1095 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 TRAV17A0A0B4J275 112 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 C1QL1O75973 258 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 BCL2P10415 239 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 OR4S2Q8NH73 311 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 RAB24Q969Q5 203 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
SOX4-201ENST00000244745 ZNHIT1O43257 154 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 PGA4P0DJD7 388 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 SCGB1C2P0DMR2 95 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 OR4A4PQ8NGN8 299 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 A0A0B4J293 547 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 GCGP01275 180 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 AAMDCQ9H7C9 122 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 IL36GQ9NZH8 169 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 GPR132Q9UNW8 380 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 ZNF785A8K8V0 405 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 CD99P14209 185 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 ORM2P19652 201 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 CRYBA2P53672 197 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 RARRES2Q99969 163 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 NPDC1Q9NQX5 325 aaPredicted RBP17.29■□□□□ 0.36
SOX4-201ENST00000244745 TINAGQ9UJW2 476 aa17.29■□□□□ 0.36
SOX4-201ENST00000244745 HOXA6P31267 233 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 SIAH2O43255 324 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 SRSF10O75494 262 aaKnown RBP17.28■□□□□ 0.36
SOX4-201ENST00000244745 ROM1Q03395 351 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 PSG5Q15238 335 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 OR4F17Q8NGA8 305 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 OR1B1Q8NGR6 318 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 CLN8Q9UBY8 286 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 THY1P04216 161 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 MPLP40238 635 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 CDX1P47902 265 aaPredicted RBP17.28■□□□□ 0.36
SOX4-201ENST00000244745 UBE2L3P68036 154 aaKnown RBP17.28■□□□□ 0.36
SOX4-201ENST00000244745 PET117Q6UWS5 81 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 GFRALQ6UXV0 394 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 OR1L4Q8NGR5 311 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 SRD5A3Q9H8P0 318 aa17.28■□□□□ 0.36
SOX4-201ENST00000244745 ISG15P05161 165 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 MAP1LC3CQ9BXW4 147 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 P2RY4P51582 365 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 HIST3H3Q16695 136 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 H1FOOQ8IZA3 346 aaPredicted RBP17.27■□□□□ 0.36
SOX4-201ENST00000244745 GAL3ST2Q9H3Q3 398 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 IGKV1D-42A0A075B6H8 117 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 CIDEAO60543 219 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 CSN3P07498 182 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 CCL17Q92583 94 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 KCNK17Q96T54 332 aa17.27■□□□□ 0.36
SOX4-201ENST00000244745 APCSP02743 223 aa17.27■□□□□ 0.35
SOX4-201ENST00000244745 EIF3IQ13347 325 aaKnown RBP17.27■□□□□ 0.35
SOX4-201ENST00000244745 DDA1Q9BW61 102 aa17.27■□□□□ 0.35
SOX4-201ENST00000244745 OR6C3Q9NZP0 311 aa17.27■□□□□ 0.35
SOX4-201ENST00000244745 ZNF207O43670 478 aaKnown RBP17.27■□□□□ 0.35
SOX4-201ENST00000244745 PGA5P0DJD9 388 aa17.27■□□□□ 0.35
SOX4-201ENST00000244745 SRP14P37108 136 aaKnown RBP17.27■□□□□ 0.35
SOX4-201ENST00000244745 SOX8P57073 446 aa17.27■□□□□ 0.35
SOX4-201ENST00000244745 TGIF2LXQ8IUE1 241 aa17.27■□□□□ 0.35
SOX4-201ENST00000244745 OR5A2Q8NGI9 324 aa17.26■□□□□ 0.35
SOX4-201ENST00000244745 SP7Q8TDD2 431 aaPredicted RBP17.26■□□□□ 0.35
SOX4-201ENST00000244745 TMEM167BQ9NRX6 74 aa17.26■□□□□ 0.35
SOX4-201ENST00000244745 A0A0U1RQV5 110 aa17.26■□□□□ 0.35
SOX4-201ENST00000244745 MRPS11P82912 194 aaKnown RBP17.26■□□□□ 0.35
SOX4-201ENST00000244745 LINC00596Q86U02 117 aa17.26■□□□□ 0.35
SOX4-201ENST00000244745 AQP10Q96PS8 301 aa17.26■□□□□ 0.35
SOX4-201ENST00000244745 RNF122Q9H9V4 155 aa17.26■□□□□ 0.35
SOX4-201ENST00000244745 WBP1LQ9NX94 342 aa17.26■□□□□ 0.35
SOX4-201ENST00000244745 TECRQ9NZ01 308 aaKnown RBP17.26■□□□□ 0.35
SOX4-201ENST00000244745 WASHC3Q9Y3C0 194 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms