RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LINC00596Q86U02 117 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 MCEMP1Q8IX19 187 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 IL22RA1Q8N6P7 574 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 RIMS4Q9H426 269 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-202ENST00000244303 C12orf49Q9H741 205 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 TAAR3PQ9P1P4 343 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 FAM186AA6NE01 2351 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 EPHA1P21709 976 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 APLNRP35414 380 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 SULT1A1P50225 295 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 GNG3P63215 75 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 RNPS1Q15287 305 aaKnown RBP12.25□□□□□ -0.45
HIF3A-202ENST00000244303 ZNF573Q86YE8 665 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 FAM58AQ8N1B3 248 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 GTF3AQ92664 365 aaKnown RBP12.25□□□□□ -0.45
HIF3A-202ENST00000244303 MPC1Q9Y5U8 109 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 A0A1B0GW64 132 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 OR5B21A6NL26 309 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 WRBO00258 174 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 HSPA12AO43301 675 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 RHBDL1O75783 438 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 SP1P08047 785 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 CA6P23280 308 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 F2RP25116 425 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 EIF2S3P41091 472 aaKnown RBP12.24□□□□□ -0.45
HIF3A-202ENST00000244303 MEOX1P50221 254 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 HLA-DRB3P79483 266 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 RUNX1Q01196 453 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 ZNF154Q13106 437 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 ZNF324BQ6AW86 544 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-202ENST00000244303 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 SPSB3Q6PJ21 355 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 OR10J5Q8NHC4 309 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 IL22RA2Q969J5 263 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 FER1L6-AS2Q96M78 137 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 DLL3Q9NYJ7 618 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 OR2W1Q9Y3N9 320 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 LIPGQ9Y5X9 500 aa12.24□□□□□ -0.45
HIF3A-202ENST00000244303 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 A0A1W2PPE2 198 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 ARGFXA6NJG6 315 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 AP4M1O00189 453 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 CLN5O75503 358 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 MMP9P14780 707 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 PAX9P55771 341 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 IL24Q13007 206 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 CLN3Q13286 438 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 SPATA46Q5T0L3 261 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 ZNF880Q6PDB4 577 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 OR1J1Q8NGS3 322 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 OR51H1Q8NH63 302 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 ERRFI1Q9UJM3 462 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-202ENST00000244303 RNF115Q9Y4L5 304 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 IL18BPO95998 194 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 IFNA17P01571 189 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 BAXQ07812 192 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 RHEBQ15382 184 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 TRIP6Q15654 476 aaKnown RBP12.23□□□□□ -0.45
HIF3A-202ENST00000244303 H1FOOQ8IZA3 346 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-202ENST00000244303 MDS2Q8NDY4 140 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 IL1F10Q8WWZ1 152 aa12.23□□□□□ -0.45
HIF3A-202ENST00000244303 KLF13Q9Y2Y9 288 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-202ENST00000244303 RBFOX3A6NFN3 312 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 PSG2P11465 335 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 S100GP29377 79 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 VASH2Q86V25 355 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 OR1K1Q8NGR3 316 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 GPR146Q96CH1 333 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 OR1A1Q9P1Q5 309 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 TRBV23-1A0A0A0MS06 115 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 TRAV39A0A0B4J263 110 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 H3BP45 60 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 IGHV2-5P01817 119 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 IZUMO4Q1ZYL8 232 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 MDP1Q86V88 176 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 OR8G5Q8NG78 346 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 GNPNAT1Q96EK6 184 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-202ENST00000244303 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 PKIBQ9C010 78 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 OR51I2Q9H344 312 aa12.22□□□□□ -0.45
HIF3A-202ENST00000244303 PUS1Q9Y606 427 aaKnown RBP eCLIP12.22□□□□□ -0.45
HIF3A-202ENST00000244303 KLRC4-KLRK1H3BQV0 150 aa12.21□□□□□ -0.45
HIF3A-202ENST00000244303 DEGS1O15121 323 aa12.21□□□□□ -0.45
HIF3A-202ENST00000244303 OR2C1O95371 312 aa12.21□□□□□ -0.45
HIF3A-202ENST00000244303 ATP5SQ99766 215 aa12.21□□□□□ -0.45
HIF3A-202ENST00000244303 TMPRSS5Q9H3S3 457 aa12.21□□□□□ -0.45
HIF3A-202ENST00000244303 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
HIF3A-202ENST00000244303 PCNX2A6NKB5 2137 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 SERPINE2P07093 398 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 RAB2AP61019 212 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 HAGHQ16775 308 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 Q6P435 159 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF295-AS1Q8N0V1 137 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 PRR18Q8N4B5 295 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 OR10V1Q8NGI7 309 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms