RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GLS2Q9UI32 602 aa11.02□□□□□ -0.65
DDX39A-201ENST00000242776 TBL2Q9Y4P3 447 aaKnown RBP11.02□□□□□ -0.65
DDX39A-201ENST00000242776 U3KQK5 164 aa11.02□□□□□ -0.65
DDX39A-201ENST00000242776 DUS4LO95620 317 aaKnown RBP11.01□□□□□ -0.65
DDX39A-201ENST00000242776 MGMTP16455 207 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 NPBWR2P48146 333 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 EDDM3BP56851 147 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 ERVK11-1P61568 191 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 EGFEM1PQ0D2K5 195 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 C2orf76Q3KRA6 126 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 ABCA11PQ4W5N1 156 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 C9orf152Q5JTZ5 239 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 SPIN3Q5JUX0 258 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 LINC00596Q86U02 117 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 ZNF561Q8N587 486 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 LINC00482Q8N8I6 264 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 Q8NFD4 153 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 OR4X2Q8NGF9 303 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 OR10K1Q8NGX5 313 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 LGALS14Q8TCE9 139 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 URM1Q9BTM9 101 aaKnown RBP11.01□□□□□ -0.65
DDX39A-201ENST00000242776 HMG20AQ9NP66 347 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 RBFOX1Q9NWB1 397 aaKnown RBP11.01□□□□□ -0.65
DDX39A-201ENST00000242776 RAB22AQ9UL26 194 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 SPATA2Q9UM82 520 aa11.01□□□□□ -0.65
DDX39A-201ENST00000242776 TMEM272A0A1B0GTI8 110 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 TMEM14DPA8MWL7 114 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 ODF3BA8MYP8 253 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 TK1P04183 234 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 SNRPBP14678 240 aaKnown RBP11□□□□□ -0.65
DDX39A-201ENST00000242776 RAB6AP20340 208 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 DLX6P56179 175 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 IL13RA2Q14627 380 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 NHLRC3Q5JS37 347 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 ASCC1Q8N9N2 400 aaKnown RBP11□□□□□ -0.65
DDX39A-201ENST00000242776 OR51T1Q8NGJ9 327 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 PTX4Q96A99 478 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 A0A0B4J203 849 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 C17orf98A8MV24 154 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 H3BUI4 141 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 SCGNO76038 276 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 RBM11P57052 281 aaKnown RBP11□□□□□ -0.65
DDX39A-201ENST00000242776 ZNF626Q68DY1 528 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 C18orf65Q6ZTR6 163 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 MRPL41Q8IXM3 137 aaKnown RBP11□□□□□ -0.65
DDX39A-201ENST00000242776 CAPSLQ8WWF8 208 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 FAM46BQ96A09 425 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 SELENOIQ9C0D9 397 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 KCNK15Q9H427 330 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 BANF2Q9H503 90 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 COMMD3Q9UBI1 195 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 ADAM30Q9UKF2 790 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 ST3GAL6Q9Y274 331 aa11□□□□□ -0.65
DDX39A-201ENST00000242776 A0A075B6Q4 140 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 A0A1W2PP11 408 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 METTL21EPA6NDL7 271 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A10PA6NDY2 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A18PA6NE21 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A16PA6NEW6 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A20PA6NIJ5 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A7PA6NKC0 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A22PA8MWA6 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A12PA8MX19 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A5PA8MXJ8 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A23PA8MXZ1 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 LDLRAD4O15165 306 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A15PP0C7V4 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A13PP0C7W8 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A14PP0C7W9 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 FAM90A24PP0C7X0 464 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 IGHV1-8P0DP01 117 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 SNU13P55769 128 aaKnown RBP10.99□□□□□ -0.65
DDX39A-201ENST00000242776 RPS27AP62979 156 aaKnown RBP10.99□□□□□ -0.65
DDX39A-201ENST00000242776 QRFPP83859 136 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 COL10A1Q03692 680 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 UNC119Q13432 240 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 EDDM3AQ14507 147 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 ZNF146Q15072 292 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 MPV17LQ2QL34 196 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 CNPY1Q3B7I2 92 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 UBE2NLQ5JXB2 153 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 OR10K2Q6IF99 312 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 ETV3LQ6ZN32 361 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 TMEM104Q8NE00 496 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 MCFD2Q8NI22 146 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 Q96M66 194 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 CMTM3Q96MX0 182 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 SLIRPQ9GZT3 109 aaKnown RBP10.99□□□□□ -0.65
DDX39A-201ENST00000242776 A3GALT2U3KPV4 340 aa10.99□□□□□ -0.65
DDX39A-201ENST00000242776 DYNC2H1Q8NCM8 4307 aaKnown RBP10.98□□□□□ -0.65
DDX39A-201ENST00000242776 F8VVB4 439 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 F8VWA3 439 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 SH2D1BO14796 132 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 RGS5O15539 181 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 ZNF728P0DKX0 622 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 LMO1P25800 156 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 PIGYQ3MUY2 71 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 TPRX1Q8N7U7 411 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 SAMD12Q8N8I0 201 aa10.98□□□□□ -0.65
DDX39A-201ENST00000242776 OR11H6Q8NGC7 330 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms