RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 GLYATL2Q8WU03 294 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 TOMM40LQ969M1 308 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 THOC3Q96J01 351 aaKnown RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SPIN2AQ99865 258 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SPIN2BQ9BPZ2 258 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 NRIP2Q9BQI9 281 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF442Q9H7R0 627 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 RHOFQ9HBH0 211 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SPACA1Q9HBV2 294 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 TREM1Q9NP99 234 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SLC7A10Q9NS82 523 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 FAM212BQ9NTI7 297 aaPredicted RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 TRBV6-6A0A0A6YYG2 114 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 KIR2DS1A0A191URI9 304 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 FAM74A7A6NL05 159 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 ST8SIA3O43173 380 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 MED6O75586 246 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 OR7C1O76099 320 aaPredicted RBP6.67□□□□□ -1.34
CXCR4-201ENST00000241393 NAPSAO96009 420 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 PPYP01298 95 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 CD5P06127 495 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 AADACP22760 399 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 IL32P24001 234 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 KIR2DS4P43632 304 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 PRDX4Q13162 271 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 KIR2DS1Q14954 304 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 DAZAP2Q15038 168 aaPredicted RBP6.67□□□□□ -1.34
CXCR4-201ENST00000241393 FAM74A3Q4VXF1 159 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 OR2A2Q6IF42 318 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 MRPL21Q7Z2W9 205 aaKnown RBP6.67□□□□□ -1.34
CXCR4-201ENST00000241393 CALHM1Q8IU99 346 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 OR56B2PQ8NGI1 322 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 OR5A2Q8NGI9 324 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 GINS3Q9BRX5 216 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 STRAPQ9Y3F4 350 aaKnown RBP6.67□□□□□ -1.34
CXCR4-201ENST00000241393 LSM5Q9Y4Y9 91 aaKnown RBP6.67□□□□□ -1.34
CXCR4-201ENST00000241393 NCKAP5O14513 1909 aa6.67□□□□□ -1.34
CXCR4-201ENST00000241393 TNRC6AQ8NDV7 1962 aaKnown RBP6.66□□□□□ -1.34
CXCR4-201ENST00000241393 OR5B21A6NL26 309 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 ATP6V1G2-DDX39BF2Z307 99 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 RNASEK-C17orf49H0YIS7 233 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 GPR31O00270 319 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 KLK10O43240 276 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 TSPAN9O75954 239 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 MMP9P14780 707 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 MUC1P15941 1255 aaPredicted RBP6.66□□□□□ -1.34
CXCR4-201ENST00000241393 PAX6P26367 422 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 LPAR6P43657 344 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 KCNJ3P48549 501 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 DVL1P1P54792 670 aaPredicted RBP6.66□□□□□ -1.34
CXCR4-201ENST00000241393 UCP2P55851 309 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 FXYD4P59646 89 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 GUCA2BQ16661 112 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 PHLDA2Q53GA4 152 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 SPINK14Q6IE38 97 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 HAGHLQ6PII5 290 aaPredicted RBP6.66□□□□□ -1.34
CXCR4-201ENST00000241393 DHRS13Q6UX07 377 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 FBXW12Q6X9E4 464 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 LYZL2Q7Z4W2 148 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 BOLLQ8N9W6 283 aaKnown RBP6.66□□□□□ -1.34
CXCR4-201ENST00000241393 OR4D5Q8NGN0 318 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 HPSE2Q8WWQ2 592 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 IL22RA2Q969J5 263 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 APH1AQ96BI3 265 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM56Q96MV1 263 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 PAPOLGQ9BWT3 736 aaKnown RBP6.66□□□□□ -1.34
CXCR4-201ENST00000241393 TTTY12Q9BZ98 90 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM222Q9H0R3 208 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 TLNRD1Q9H1K6 362 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 HRH4Q9H3N8 390 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 Q9N2K0 584 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF581Q9P0T4 197 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 PRELID1Q9Y255 219 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 KLF13Q9Y2Y9 288 aaPredicted RBP6.66□□□□□ -1.34
CXCR4-201ENST00000241393 MPC1Q9Y5U8 109 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM56-RWDD3S4R434 201 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 PCSK5Q92824 1860 aa6.66□□□□□ -1.34
CXCR4-201ENST00000241393 C3orf85A0A1B0GTC6 90 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 CLEC18AA5D8T8 446 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 TRDCB7Z8K6 153 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 TRAPPC2LH3BP13 241 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 H7C2Y5 167 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 NUPL2O15504 423 aaKnown RBP6.65□□□□□ -1.34
CXCR4-201ENST00000241393 PHF1O43189 567 aaPredicted RBP6.65□□□□□ -1.34
CXCR4-201ENST00000241393 NUDT3O95989 172 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 IGLV2-14P01704 120 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 WNT2P09544 360 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 DANCRP0C864 163 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 SPP1P10451 314 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 RCC1P18754 421 aaPredicted RBP6.65□□□□□ -1.34
CXCR4-201ENST00000241393 GNMTQ14749 295 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 OR1C1Q15619 314 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 HFEQ30201 348 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 SP6Q3SY56 376 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 DCAF10Q5QP82 559 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 Q6ZRG5 221 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 FAM219AQ8IW50 185 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 FOXRED2Q8IWF2 684 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 TUSC5Q8IXB3 177 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM251Q8N6I4 163 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms